SecReT4
T4SS ID618
StrainBacillus atrophaeus 1942
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014639
Location1272..16289
NameYdd
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentYdcQYddBYddCYddDYddEYddGYddH
Number1111111

The information of T4SS components from NC_014639
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1BATR1942_00010277..837 [-], 561311066970hypothetical protein 
2BATR1942_000151272..2636 [+], 1365311066971DNA wielding protein; mobile element region  YdcQ
3BATR1942_000202646..3704 [+], 1059311066972replication protein; mobile element region 
4BATR1942_000253968..4240 [+], 273311066973hypothetical protein 
5BATR1942_000304227..4793 [-], 567311066974hypothetical protein 
6BATR1942_000354867..5043 [-], 177311066975hypothetical protein 
7BATR1942_000405123..5389 [+], 267311066976hypothetical protein 
8BATR1942_000455412..5519 [-], 108311066977hypothetical protein 
9BATR1942_000505701..6459 [+], 759311066978hypothetical protein 
10BATR1942_000556800..6988 [-], 189311066979hypothetical protein 
11BATR1942_000607083..7361 [+], 279311066980hypothetical protein 
12BATR1942_000657379..7528 [+], 150311066981hypothetical protein 
13BATR1942_000707556..8620 [+], 1065311066982hypothetical protein  YddB
14BATR1942_000758632..8880 [+], 249311066983hypothetical protein  YddC
15BATR1942_000808893..9417 [+], 525311066984hypothetical protein  YddD
16BATR1942_000859407..11800 [+], 2394311066985hypothetical protein  YddE
17BATR1942_0009011818..12033 [+], 216311066986hypothetical protein 
18BATR1942_0009512157..14592 [+], 2436311066987hypothetical protein  YddG
19BATR1942_0010014626..15219 [-], 594311066988hypothetical protein 
20BATR1942_0010515327..16289 [+], 963311066989cell wall hydrolase; mobile element region  YddH
21BATR1942_0011016304..16807 [+], 504311066990hypothetical protein 
22BATR1942_0011516872..17255 [+], 384311066991lipoprotein 
23BATR1942_0012017473..18591 [+], 1119311066992hypothetical protein 
24BATR1942_0012518851..20026 [+], 1176311066993response regulator aspartate phosphatase; mobile element region 
25BATR1942_0013020568..20945 [+], 378311066994hypothetical protein 
26BATR1942_0013520962..21138 [+], 177311066995hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEBat1942-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation