SecReT4
T4SS ID620
StrainStaphylococcus aureus subsp. aureus COL
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_002951
Location1611280..1618789
NameYdd
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentYdcQYddBYddCYddDYddEYddGYddH
Number1111110

The information of T4SS components from NC_002951
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SACOL1572 (accB)1607302..1607766 [-], 46557650484acetyl-CoA carboxylase, biotin carboxyl carrier protein 
2SACOL15741609250..1609591 [-], 34257650485hypothetical protein 
3SACOL15751609647..1610237 [-], 59157650486hypothetical protein 
4SACOL15761610244..1611290 [-], 104757650487traG protein 
5SACOL15771611280..1613127 [-], 184857650488hypothetical protein  YddG
6SACOL15781613132..1614490 [-], 135957650489FtsK/SpoIIIE family protein  YdcQ
7SACOL15791614544..1617039 [-], 249657650490hypothetical protein  YddE
8SACOL15801617074..1617457 [-], 38457650491hypothetical protein  YddD
9SACOL15811617469..1617729 [-], 26157650492hypothetical protein  YddC
10SACOL15821617734..1618789 [-], 105657650493hypothetical protein  YddB
11SACOL15831618850..1619941 [-], 109257651919replication initiation factor family protein 
12SACOL15841620116..1620418 [-], 30357651920hypothetical protein 
13SACOL15851620432..1620752 [-], 32157651921hypothetical protein 
14SACOL15861620903..1621187 [-], 28557651922hypothetical protein 
15SACOL1587 (efp)1621582..1622139 [-], 55857651923elongation factor P 
16SACOL15881622165..1623226 [-], 106257651924proline dipeptidase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESauCOL-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation