SecReT4
T4SS ID621
StrainStaphylococcus aureus subsp. aureus MRSA252
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_002952
Location1354503..1362012
NameYdd
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentYdcQYddBYddCYddDYddEYddGYddH
Number1111110

The information of T4SS components from NC_002952
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SAR12851350840..1351037 [+], 19849483473hypothetical protein 
2SAR12881352458..1352814 [-], 35749483474lipoprotein 
3SAR12891352870..1353460 [-], 59149483475hypothetical protein 
4SAR12901353467..1354453 [-], 98749483476hypothetical protein 
5SAR12911354503..1356350 [-], 184849483477hypothetical protein  YddG
6SAR12921356355..1357713 [-], 135949483478FtsK/SpoIIIE family protein  YdcQ
7SAR12931357767..1360262 [-], 249649483479hypothetical protein  YddE
8SAR12941360297..1360680 [-], 38449483480hypothetical protein  YddD
9SAR12951360692..1360952 [-], 26149483481hypothetical protein  YddC
10SAR12961360957..1362012 [-], 105649483482hypothetical protein  YddB
11SAR12971362073..1363098 [-], 102649483483hypothetical protein 
12SAR12981363340..1363642 [-], 30349483484hypothetical protein 
13SAR12991363656..1363976 [-], 32149483485hypothetical protein 
14SAR13001364127..1364420 [-], 29449483486hypothetical protein 
15SAR13021365097..1365309 [+], 21349483487hypothetical protein 
16SAR13031365606..1365812 [+], 20749483488hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESauMRSA252-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation