SecReT4
T4SS ID622
StrainStaphylococcus aureus subsp. aureus USA300_FPR3757
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_007793
Location1634116..1641625
NameYdd
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentYdcQYddBYddCYddDYddEYddGYddH
Number1111110

The information of T4SS components from NC_007793
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SAUSA300_1476 (accB)1630123..1630587 [-], 46587161082acetyl-CoA carboxylase, biotin carboxyl carrier protein 
2SAUSA300_14781632071..1632427 [-], 35787161616putative lipoprotein 
3SAUSA300_14791632483..1633073 [-], 59187162398hypothetical protein 
4SAUSA300_14801633080..1634126 [-], 104787160368putative traG membrane protein 
5SAUSA300_14811634116..1635963 [-], 184887160603hypothetical protein  YddG
6SAUSA300_14821635968..1637326 [-], 135987161179FtsK/SpoIIIE family protein  YdcQ
7SAUSA300_14831637380..1639875 [-], 249687162078hypothetical protein  YddE
8SAUSA300_14841639910..1640293 [-], 38487160106hypothetical protein  YddD
9SAUSA300_14851640305..1640565 [-], 26187161643hypothetical protein  YddC
10SAUSA300_14861640570..1641625 [-], 105687161147hypothetical protein  YddB
11SAUSA300_14871641686..1642777 [-], 109287161598replication initiation factor family protein 
12SAUSA300_14881642952..1643254 [-], 30387162158hypothetical protein 
13SAUSA300_14891643268..1643588 [-], 32187161592hypothetical protein 
14SAUSA300_1490 (efp)1644418..1644975 [-], 55887162222elongation factor P 
15SAUSA300_14911645001..1646062 [-], 106287160808proline dipeptidase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESauFPR3757-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation