SecReT4
T4SS ID63
StrainPseudomonas sp. ADP plasmid pADP-1 (NC_004956)
Repliconplasmid pADP-1 [Browse all T4SS(s) in this replicon]
AccessionNC_004956
Location14780..17226; 76280..88211
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_004956
Region 1: 14780..17226
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pADP-1_p017 (traM)10197..10637 [-], 44132455802TraM protein 
2pADP-1_p018 (traL)10637..11362 [-], 72632455803TraL protein 
3pADP-1_p019 (traK)11362..11760 [-], 39932455804TraK protein 
4pADP-1_p020 (traJ)12134..12508 [+], 37532455805TraJ protein 
5pADP-1_p021 (traI)12543..14783 [+], 224132455806TraI protein 
6pADP-1_p022 (traH)14089..14481 [+], 39332455807TraH protein 
7pADP-1_p023 (traG)14780..16693 [+], 191432455808TraG protein  TraG
8pADP-1_p024 (traF)16690..17226 [+], 53732455809TraF protein  TraF
9pADP-1_p025 (traE)17238..19301 [+], 206432455810TraE protein 
10pADP-1_p026 (traD)19323..19712 [+], 39032455811TraD protein 
 
Region 2: 76280..88211
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pADP-1_p072 (orf72)71488..72447 [-], 96032455856carbamoyl phosphate synthetase-like protein 
2pADP-1_p073 (tnpA)72897..74444 [-], 154832455857putative transposase 
3pADP-1_p074 (orf74)74260..75759 [-], 150032455858dihydrolipoamide dehydrogenase homolog 
4pADP-1_p075 (orf75)75908..76264 [+], 35732455859putative transposase 
5pADP-1_p076 (trbN)76280..76915 [-], 63632455860TrbN protein  TrbN
6pADP-1_p077 (trbM)76929..77516 [-], 58832455861TrbM protein 
7pADP-1_p078 (trbL)77534..79252 [-], 171932455862TrbL protein  TrbL
8pADP-1_p079 (trbK)79263..79490 [-], 22832455863TrbK protein  TrbK
9pADP-1_p080 (trbJ)79500..80264 [-], 76532455864TrbJ protein  TrbJ
10pADP-1_p081 (trbI)80285..81706 [-], 142232455865TrbI protein  TrbI
11pADP-1_p082 (trbH)81711..82199 [-], 48932455866TrbH protein  TrbH
12pADP-1_p083 (trbG)82202..83122 [-], 92132455867TrbG protein  TrbG
13pADP-1_p084 (trbF)83119..83901 [-], 78332455868TrbF protein  TrbF
14pADP-1_p085 (trbE)83898..86456 [-], 255932455869TrbE protein  TrbE
15pADP-1_p086 (trbD)86453..86764 [-], 31232455870TrbD protein  TrbD
16pADP-1_p087 (trbC)86768..87232 [-], 46532455871TrbC protein  TrbC
17pADP-1_p088 (trbB)87249..88211 [-], 96332455872TrbB protein  TrbB
18pADP-1_p089 (trbA)88521..88883 [-], 36332455873TrbA protein 
19pADP-1_p090 (ssb)88997..89338 [+], 34232455874SSB protein 
20pADP-1_p091 (trfA)89488..90399 [+], 91232455875TrfA protein 
21pADP-1_p092 (tnpA)90795..92165 [-], 137132455876putative transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_004956