SecReT4
T4SS ID647
StrainStaphylococcus pseudintermedius HKU10-03
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014925
Location2201927..2212592
NameTra_Tn
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111111

The information of T4SS components from NC_014925
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SPSINT_21092197115..2197318 [-], 204319893398Tn916 ORF1- like transposon excisionase 
2SPSINT_21102198006..2198428 [-], 423319893399Tn916-associated hypothetical protein 
3SPSINT_21112198932..2199285 [+], 354319893400Tn916-associated transcriptional regulator 
4SPSINT_21122199631..2201550 [-], 1920319893401tetracycline resistance protein TetM 
5SPSINT_21132201927..2202859 [-], 933319893402hypothetical protein  Orf13_Tn
6SPSINT_21142202856..2203857 [-], 1002319893403lipoprotein, NLP/P60 family  Orf14_Tn
7SPSINT_21152203854..2206031 [-], 2178319893404hypothetical protein  Orf15_Tn
8SPSINT_21162206034..2208481 [-], 2448319893405hypothetical protein  Orf16_Tn
9SPSINT_21172208465..2208857 [-], 393319893406Tn916-associated hypothetical protein  Orf17_Tn
10SPSINT_21182208946..2209443 [-], 498319893407antirestriction protein 
11SPSINT_21192209560..2209781 [-], 222319893408Conjugation-like protein  Orf19_Tn
12SPSINT_21202209824..2211029 [-], 1206319893409Tn916-associated transcriptional regulator 
13SPSINT_21212211207..2212592 [-], 1386319893410cell division protein FtsK  Orf21_Tn
14SPSINT_21222212621..2213007 [-], 387319893411hypothetical protein 
15SPSINT_21232213023..2213178 [-], 156319893412hypothetical protein 
16SPSINT_21242213663..2213908 [+], 246319893413hypothetical protein 
17SPSINT_21252214798..2216657 [-], 1860319893414hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESpsHKU1003-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation