SecReT4
T4SS ID653
StrainListeria monocytogenes EGD-e
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_003210
Location1137997..1149003
NameTra_Tn
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111111

The information of T4SS components from NC_003210
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1lmo10981133466..1133696 [-], 23116803138hypothetical protein 
2lmo10991133698..1134117 [-], 42016803139hypothetical protein 
3lmo1100 (cadA)1134472..1136595 [-], 212416803140cadmium resistance protein 
4lmo11011136900..1137400 [+], 50116803141hypothetical protein 
5lmo11021137533..1137868 [-], 33616803142hypothetical protein 
6lmo11031137997..1138914 [-], 91816803143hypothetical protein  Orf13_Tn
7lmo11041138930..1139940 [-], 101116803144hypothetical protein  Orf14_Tn
8lmo11051139940..1142099 [-], 216016803145hypothetical protein  Orf15_Tn
9lmo11061142099..1144549 [-], 245116803146hypothetical protein  Orf16_Tn
10lmo11071144533..1144928 [-], 39616803147hypothetical protein  Orf17_Tn
11lmo11081145211..1145711 [-], 50116803148hypothetical protein 
12lmo11091145723..1145944 [-], 22216803149hypothetical protein  Orf19_Tn
13lmo11101145941..1146231 [-], 29116803150hypothetical protein 
14lmo11111146228..1147412 [-], 118516803151hypothetical protein 
15lmo11121147603..1149003 [-], 140116803152hypothetical protein  Orf21_Tn
16lmo11131149011..1149385 [-], 37516803153hypothetical protein 
17lmo11141149406..1149720 [-], 31516803154hypothetical protein 
18lmo11151149887..1152475 [-], 258916803155hypothetical protein 
19lmo11161153010..1153783 [+], 77416803156hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICELm1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation