SecReT4
T4SS ID658
StrainStreptococcus pneumoniae Hungary19A-6
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010380
Location1308321..1321838
NameTra_Tn
Functionconjugation
ClassificationType IVD; Type GP
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111111

The information of T4SS components from NC_010380
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SPH_14031303508..1303711 [-], 204169834305hypothetical protein 
2SPH_14041303695..1303946 [+], 252169832644hypothetical protein 
3SPH_14051304172..1304402 [-], 231169833294hypothetical protein 
4SPH_14061304399..1304821 [-], 423169832527RNA polymerase sigma-70 region 4 family protein 
5SPH_14071305050..1305196 [-], 147169833600hypothetical protein 
6SPH_14081305326..1305679 [+], 354169834110transcriptional regulator 
7SPH_14091306025..1307944 [-], 1920169834491tetracycline resistance protein 
8SPH_14101307960..1308076 [-], 117169834207tetracycline resistance determinant leader peptide 
9SPH_14111308321..1309238 [-], 918169833889conjugative transposon protein  Orf13_Tn
10SPH_14121309253..1310254 [-], 1002169833250NLP/P60 family protein  Orf14_Tn
11SPH_14131310251..1312428 [-], 2178169832673conjugative transposon membrane protein  Orf15_Tn
12SPH_14141312431..1314878 [-], 2448169834234conjugative transposon protein  Orf16_Tn
13SPH_14151314862..1315368 [-], 507169833648conjugative transposon membrane protein  Orf17_Tn
14SPH_14161315343..1315840 [-], 498169834223conjugative transposon protein 
15SPH_14171315957..1316178 [-], 222169833034hypothetical protein  Orf19_Tn
16SPH_14181316358..1317605 [+], 1248169834467transposase 
17SPH_14191317726..1317917 [-], 192169833015hypothetical protein 
18SPH_14201317862..1318599 [-], 738169833871rRNA adenine N-6-methyltransferase (macrolide-lincosamide-streptogramin B resistance protein) 
19SPH_14221319046..1320275 [-], 1230169833987Cro/CI family transcriptional regulator 
20SPH_14231320453..1321838 [-], 1386169833242DNA translocase FtsK  Orf21_Tn
21SPH_14241321867..1322250 [-], 384169832738conjugative transposon protein 
22SPH_14251322269..1322583 [-], 315169834020conjugative transposon protein 
23SPH_14261322606..1322725 [-], 120169833660hypothetical protein 
24SPH_1427 (uraA)1323215..1324498 [+], 1284169833712uracil permease 
25SPH_1428 (ffh)1324594..1326165 [-], 1572169832782signal recognition particle protein 
26SPH_14291326177..1326509 [-], 333169834531DNA-binding protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESpnH19A6-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation