SecReT4
T4SS ID667
StrainClostridium difficile 630
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009089
Location440599..452591
NameTra_Tn
Functionconjugation
ClassificationType IVD; Type GP
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111111

The information of T4SS components from NC_009089
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CD630_03640435772..436542 [-], 771126697934ABC transporter ATP-binding protein Tn916-like, CTn1-Orf9 
2CD630_03650436715..437446 [-], 732126697935ABC transporter multidrug-family permease Tn916-like, CTn1-Orf10 
3CD630_03660437439..438365 [-], 927126697936ABC transporter multidrug-family ATP-binding protein Tn916-like, CTn1-Orf11 
4CD630_03670438435..439343 [-], 909126697937two-component sensor histidine kinase,Tn916-like,CTn1-Orf12 
5CD630_03680439346..440038 [-], 693126697938two-component response regulator,Tn916-like,CTn1-Orf13 
6CD630_03690440069..440293 [-], 225400927257conjugative transposon protein 
7CD630_03700440311..440511 [-], 201126697940HTH-type transcriptional regulator 
8CD630_03710440599..441510 [-], 912126697941conjugative transposon protein  Orf13_Tn
9CD630_03720441526..442533 [-], 1008126697942cell wall hydrolase  Orf14_Tn
10CD630_03730442530..444737 [-], 2208400927258membrane protein 
11CD630_03740444737..447187 [-], 2451126697944ATPase  Orf16_Tn
12CD630_03750447165..447563 [-], 399126697945conjugative transposon protein  Orf17_Tn
13CD630_03760447677..448180 [-], 504126697946antirestriction protein 
14CD630_03770448198..448701 [-], 504126697947antirestriction protein 
15CD630_03780448620..448916 [-], 297400927259conjugative transposon protein 
16CD630_03790448992..449213 [-], 222126697948conjugative transposon protein  Orf19_Tn
17CD630_03800449214..449348 [-], 135400927260conjugative transposon protein 
18CD630_03810449360..450472 [-], 1113126697950replication initiation factor 
19CD630_03820450811..451209 [-], 399400927261conjugative transposon protein 
20CD630_03830451221..452591 [-], 1371126697952cell-division FtsK/SpoIIIE-family protein8  Orf21_Tn
21CD630_03840452608..452997 [-], 390126697953conjugative transposon protein 
22CD630_03850453006..453332 [-], 327126697954conjugative transposon protein 
23CD630_03851453368..453553 [-], 186126697955hypothetical protein 
24CD630_03860453566..456610 [-], 3045126697956cell surface protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) CTn1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Sebaihia M; Wren BW; Mullany P; Fairweather NF; Minton N; Stabler R; Thomson NR; Roberts AP; Cerdeno-Tarraga AM; Wang H; Holden MT; Wright A; Churcher C; Quail MA; Baker S; Bason N; Brooks K; Chillingworth T; Cronin A; Davis P; Dowd L; Fraser A; Feltwell T; Hance Z; Holroyd S; Jagels K; Moule S; Mungall K; Price C; Rabbinowitsch E; Sharp S; Simmonds M; Stevens K; Unwin L; Whithead S; Dupuy B; Dougan G; Barrell B; Parkhill J (2006). The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet. 38(7):779-86. [PudMed:16804543]