SecReT4
T4SS ID669
StrainClostridium difficile 630
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009089
Location3897502..3909543
NameTra_Tn
Functionconjugation
ClassificationType IVD; Type GP
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111111

The information of T4SS components from NC_009089
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CD630_332803892914..3893153 [-], 240126700947conjugative transposon protein 
2CD630_332903893150..3893572 [-], 423126700948RNA polymerase sigma factor Tn916-like,CTn6-Orf5 
3CD630_333003894170..3894526 [+], 357126700949HTH-type transcriptional regulator 
4CD630_333103894559..3895254 [-], 696126700950conjugative transposon protein 
5CD630_333203895434..3896003 [+], 570400927531TetR family transcriptional regulator 
6CD630_333303896015..3896260 [+], 246126700952conjugative transposon protein 
7CD630_333313896491..3896733 [+], 243400927532conjugative transposon protein 
8CD630_333403896730..3897200 [+], 471126700954transcriptional regulator 
9CD630_333503897502..3898410 [-], 909126700955conjugative transposon protein  Orf13_Tn
10CD630_333603898427..3899431 [-], 1005126700956cell wall hydrolase  Orf14_Tn
11CD630_333703899428..3901809 [-], 2382126700957membrane protein  Orf15_Tn
12CD630_333803901806..3904259 [-], 2454126700958ATPase  Orf16_Tn
13CD630_333903904243..3904635 [-], 393126700959conjugative transposon protein  Orf17_Tn
14CD630_334003904725..3905222 [-], 498126700960antirestriction protein 
15CD630_334203905806..3906312 [-], 507126700961conjugative transposon protein 
16CD630_334213906498..3906719 [-], 222126700962conjugative transposon protein  Orf19_Tn
17CD630_334303906771..3907751 [-], 981126700963replication initiation factor 
18CD630_334403908146..3909543 [-], 1398126700964cell-division FtsK/SpoIIIE-family protein Tn916-like, CTn6-Orf22  Orf21_Tn
19CD630_334503909579..3909956 [-], 378126700965conjugative transposon protein 
20CD630_334603909978..3910292 [-], 315126700966conjugative transposon protein 
21CD630_334703910549..3911223 [+], 675126700967membrane protein 
22CD630_334803911224..3912117 [+], 894126700968hypothetical protein 
23CD630_33490 (bclA3)3912316..3914301 [-], 1986126700969exosporium glycoprotein BclA3 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) CTn6 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Sebaihia M; Wren BW; Mullany P; Fairweather NF; Minton N; Stabler R; Thomson NR; Roberts AP; Cerdeno-Tarraga AM; Wang H; Holden MT; Wright A; Churcher C; Quail MA; Baker S; Bason N; Brooks K; Chillingworth T; Cronin A; Davis P; Dowd L; Fraser A; Feltwell T; Hance Z; Holroyd S; Jagels K; Moule S; Mungall K; Price C; Rabbinowitsch E; Sharp S; Simmonds M; Stevens K; Unwin L; Whithead S; Dupuy B; Dougan G; Barrell B; Parkhill J (2006). The multidrug-resistant human pathogen Clostridium difficile has a highly mobile, mosaic genome. Nat Genet. 38(7):779-86. [PudMed:16804543]