SecReT4
T4SS ID674
StrainClostridium difficile CD196
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_013315
Location4024620..4037007
NameTra_Tn
FunctionNA
ClassificationType IVD; Type GP
insolico This T4SS is identified in this study.

T4SS components
ComponentOrf13_TnOrf14_TnOrf15_TnOrf16_TnOrf17_TnOrf19_TnOrf21_Tn
Number1111011

The information of T4SS components from NC_013315
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1CD196_34084021585..4021908 [+], 324260685137conjugative transposon protein 
2CD196_34094022922..4023380 [+], 459260685138hypothetical protein 
3CD196_34104023405..4023947 [+], 543260685139hypothetical protein 
4CD196_34114023983..4024510 [+], 528260685140hypothetical protein 
5CD196_34124024620..4026014 [+], 1395260685141conjugative transposon FtsK/SpoIIIE-like protein  Orf21_Tn
6CD196_34134026294..4027415 [+], 1122260685142conjugative transposon replication initiation factor 
7CD196_34144027557..4027778 [+], 222260685143conjugative transposon protein  Orf19_Tn
8CD196_34154028092..4028736 [+], 645260685144chloramphenicol o-acetyltransferase 
9CD196_34164029022..4029519 [+], 498260685145conjugative transposon protein 
10CD196_34174029535..4030038 [+], 504260685146conjugative transposon protein 
11CD196_34184030527..4032959 [+], 2433260685147conjugative transposon protein  Orf16_Tn
12CD196_34194032959..4035094 [+], 2136260685148conjugative transposon protein  Orf15_Tn
13CD196_34204035091..4036098 [+], 1008260685149cell wall hydrolase  Orf14_Tn
14CD196_34214036114..4037007 [+], 894260685150conjugative transposon protein  Orf13_Tn
15CD196_34224037220..4038077 [+], 858260685151hypothetical protein 
16CD196_34234038149..4038736 [+], 588260685152transcriptional regulator 
17CD196_34244038765..4039685 [+], 921260685153ABC transporter ATP-binding protein 
18CD196_34254039682..4040365 [+], 684260685154ABC transporter permease 
19CD196_34264040362..4041060 [+], 699260685155ABC transporter permease 
20CD196_34274041072..4041983 [+], 912260685156hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_013315