SecReT4
T4SS ID681
StrainPseudomonas fluorescens Pf-5
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_004129
Location5423444..5446316
NameTfc
Functionconjugation
ClassificationType IVC; Type G
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number001111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_004129
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PFL_4691 (rulA)5420936..5421361 [+], 426346643171ultraviolet light resistance protein RulA 
2PFL_4692 (rulB)5421354..5422625 [+], 127270732028ultraviolet light resistance protein RulB 
3PFL_62605422735..5423430 [+], 696346643172hypothetical protein 
4PFL_46935423444..5424187 [+], 74470732029integrating conjugative element protein  Tfc3
5PFL_46945424172..5424723 [+], 55270734381hypothetical protein  Tfc4
6PFL_46955424720..5425226 [+], 50770734380integrating conjugative element protein  Tfc5
7PFL_4696 (traD)5425475..5427691 [+], 221770732030conjugative coupling factor TraD  Tfc6
8PFL_46975427701..5428450 [+], 75070732031integrating conjugative element membrane protein  Tfc8
9PFL_46985428460..5429920 [+], 146170732032hypothetical protein 
10PFL_46995429936..5430238 [+], 30370732033hypothetical protein 
11PFL_47005430458..5430811 [+], 35470734383integrative conjugative element protein  Tfc9
12PFL_47015430808..5431047 [+], 24070732034integrating conjugative element protein 
13PFL_47025431062..5431400 [+], 33970732035integrating conjugative element membrane protein 
14PFL_62325431416..5431784 [+], 369346643173conjugative transfer region protein  Tfc11
15PFL_47035431796..5432440 [+], 64570732036integrating conjugative element protein  Tfc12
16PFL_47045432437..5433348 [+], 91270734382integrating conjugative element protein  Tfc13
17PFL_47055433332..5434828 [+], 149770732037integrating conjugative element protein  Tfc14
18PFL_62335434806..5435243 [+], 438346643174conjugative transfer region lipoprotein  Tfc15
19PFL_47065435245..5438169 [+], 292570732038conjugative transfer ATPase  Tfc16
20PFL_47075438166..5438471 [+], 30670732039hypothetical protein 
21PFL_47085438468..5439127 [+], 66070734384thioredoxin 
22PFL_47095441688..5442116 [+], 42970734386integrating conjugative element protein  Tfc24
23PFL_47105442113..5443051 [+], 93970734385integrating conjugative element protein  Tfc23
24PFL_47115443072..5444424 [+], 1353346643175integrating conjugative element protein  Tfc22
25PFL_47125444784..5446316 [+], 153370732041hypothetical protein  Tfc19
26PFL_47135446848..5447126 [+], 27970732042addiction module antidote protein 
27PFL_62615447123..5447488 [+], 366346643176plasmid stabilization system protein, RelE/ParE family 
28PFL_47145449040..5449906 [+], 86770734387alpha/beta hydrolase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) PFGI-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Mavrodi DV; Loper JE; Paulsen IT; Thomashow LS (2009). Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5. BMC Microbiol. 9:08. [PudMed:19144133]