SecReT4
T4SS ID70
StrainSphingomonas sp. A1 plasmid pA1 (NC_007353)
Repliconplasmid pA1 [Browse all T4SS(s) in this replicon]
AccessionNC_007353
Location11337..13774; 33696..45563
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_007353
Region 1: 11337..13774
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pA1_07 (traD)8845..9243 [-], 39973746019TraD 
2pA1_08 (traE)9262..11322 [-], 206173746020TraE 
3pA1_09 (traF)11337..11873 [-], 53773746021TraF  TraF
4pA1_10 (traG)11870..13774 [-], 190573746022TraG  TraG
5pA1_11 (traI)13771..16038 [-], 226873746023TraI 
6pA1_12 (traH)14073..14492 [-], 42073746024TraH 
7pA1_13 (traJ)16073..16444 [-], 37273746025TraJ 
8pA1_14 (traK)17034..17453 [+], 42073746026TraK 
9pA1_15 (traL)17453..18178 [+], 72673746027TraL 
10pA1_16 (traM)18178..18618 [+], 44173746028TraM 
 
Region 2: 33696..45563
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pA1_31 (klcA)28802..29233 [-], 43289142225hypothetical protein 
2pA1_32 (trfA)31316..32542 [-], 122789142226TrfA 
3pA1_33 (ssb)32590..32928 [-], 33973746041Ssb 
4pA1_34 (trbA)33091..33396 [+], 30673746042TrbA 
5pA1_35 (trbB)33696..34661 [+], 96673746043TrbB  TrbB
6pA1_36 (trbC)34683..35147 [+], 46573746044TrbC  TrbC
7pA1_37 (trbD)35151..35462 [+], 31273746045TrbD  TrbD
8pA1_38 (trbE)35459..38017 [+], 255973746046TrbE  TrbE
9pA1_39 (trbF)38014..38802 [+], 78973746047TrbF  TrbF
10pA1_40 (trbG)38799..39713 [+], 91573746048TrbG  TrbG
11pA1_41 (trbH)39716..40177 [+], 46273746049TrbH  TrbH
12pA1_42 (trbI)40182..41561 [+], 138073746050TrbI  TrbI
13pA1_43 (trbJ)41578..42351 [+], 77473746051TrbJ  TrbJ
14pA1_44 (trbK)42361..42582 [+], 22273746052TrbK  TrbK
15pA1_45 (trbL)42594..44330 [+], 173773746053TrbL  TrbL
16pA1_46 (trbM)44348..44926 [+], 57973746054TrbM 
17pA1_47 (trbN)44928..45563 [+], 63673746055TrbN  TrbN
18pA1_48 (trbO)45593..45862 [+], 27073746056TrbO 
19pA1_49 (trbP)45859..46557 [+], 69973746057TrbP 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_007353