SecReT4
T4SS ID704
StrainBurkholderia xenovorans LB400
Repliconchromosome 1 [Browse all T4SS(s) in this replicon]
AccessionNC_007951
Location3589842..3610530
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number000001011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_007951
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Bxe_A12033585210..3586319 [+], 111091784596hypothetical protein 
2Bxe_A12023586392..3588698 [+], 230791784597plasmid-related, DNA/RNA helicase 
3Bxe_A12013588812..3589681 [+], 87091784598hypothetical protein 
4Bxe_A12003589842..3590441 [+], 60091784599hypothetical protein 
5Bxe_A11993590438..3591088 [+], 65191784600hypothetical protein 
6Bxe_A11983591103..3591822 [+], 72091784601hypothetical protein 
7Bxe_A11973591804..3592394 [+], 59191784602hypothetical protein 
8Bxe_A11963592391..3592939 [+], 54991784603hypothetical protein 
9Bxe_A11953592944..3595130 [+], 218791784604hypothetical protein  Tfc6
10Bxe_A11943595127..3595876 [+], 75091784605hypothetical protein  Tfc8
11Bxe_A11933595913..3596317 [-], 40591784606hypothetical protein 
12Bxe_A11923596503..3596886 [+], 38491784607hypothetical protein  Tfc9
13Bxe_A11913596883..3597116 [+], 23491784608hypothetical protein 
14Bxe_A11903597127..3597492 [+], 36691784609hypothetical protein 
15Bxe_A11893597505..3597915 [+], 41191784610hypothetical protein  Tfc11
16Bxe_A11883597912..3598604 [+], 69391784611hypothetical protein  Tfc12
17Bxe_A11873598601..3599533 [+], 93391784612hypothetical protein  Tfc13
18Bxe_A11863599523..3600941 [+], 141991784613hypothetical protein  Tfc14
19Bxe_A11853600922..3601362 [+], 44191784614hypothetical protein  Tfc15
20Bxe_A11843601362..3604229 [+], 286891784615hypothetical protein  Tfc16
21Bxe_A11833604243..3605007 [+], 76591784616hypothetical protein 
22Bxe_A11823605191..3605685 [+], 49591784617DNA repair protein RadC 
23Bxe_A11813605844..3606290 [+], 44791784618hypothetical protein  Tfc24
24Bxe_A11803606287..3607234 [+], 94891784619hypothetical protein  Tfc23
25Bxe_A11793607244..3608641 [+], 139891784620hypothetical protein  Tfc22
26Bxe_A11783608638..3608997 [+], 36091784621hypothetical protein 
27Bxe_A11773609013..3610530 [+], 151891784622hypothetical protein  Tfc19
28Bxe_A11763610544..3610921 [-], 37891784623hypothetical protein 
29Bxe_A11753610949..3611407 [-], 45991784624hypothetical protein 
30Bxe_A11743611407..3611793 [-], 38791784625AbrB family transcriptional regulator 
31Bxe_A11733612030..3613877 [+], 184891784626hypothetical protein 
32Bxe_A11713614392..3615198 [-], 80791784627AraC family transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEBxeLB400-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation