SecReT4
T4SS ID710
StrainHerminiimonas arsenicoxydans
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_009138
Location2010192..2036064
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_009138
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HEAR19982006405..2008171 [-], 1767134095190DNA helicase II 
2HEAR19992008206..2009990 [-], 1785134095191hypothetical protein 
3HEAR20002010192..2010812 [+], 621134095192hypothetical protein  Tfc2
4HEAR20012010809..2011459 [+], 651134095193hypothetical protein 
5HEAR20022011474..2012199 [+], 726134095194signal peptide  Tfc3
6HEAR20032012181..2012771 [+], 591134095195signal peptide  Tfc4
7HEAR20042012768..2013316 [+], 549134095196signal peptide  Tfc5
8HEAR20052013321..2015507 [+], 2187134095197hypothetical protein  Tfc6
9HEAR20062015504..2016253 [+], 750134095198hypothetical protein  Tfc8
10HEAR20072016283..2018907 [-], 2625134095199hypothetical protein 
11HEAR20082019008..2020060 [-], 1053134095200hypothetical protein 
12HEAR20102020212..2020886 [-], 675134095202hypothetical protein 
13HEAR20112020949..2021893 [+], 945134095203hypothetical protein 
14HEAR20122022030..2022410 [+], 381134095204signal peptide  Tfc9
15HEAR20132022407..2022640 [+], 234134095205hypothetical protein 
16HEAR20142022657..2023016 [+], 360134095206hypothetical protein 
17HEAR20152023029..2023439 [+], 411134095207hypothetical protein  Tfc11
18HEAR20162023436..2024125 [+], 690134095208hypothetical protein  Tfc12
19HEAR20172024122..2025039 [+], 918134095209signal peptide  Tfc13
20HEAR20182025029..2026459 [+], 1431134095210signal peptide  Tfc14
21HEAR20192026440..2026880 [+], 441134095211signal peptide  Tfc15
22HEAR20202027132..2029762 [+], 2631134095212hypothetical protein  Tfc16
23HEAR20212029776..2030540 [+], 765134095213hypothetical protein 
24HEAR20222030725..2031219 [+], 495134095214RadC family DNA repair protein 
25HEAR20232031378..2031824 [+], 447134095215hypothetical protein  Tfc24
26HEAR20242031821..2032768 [+], 948134095216hypothetical protein  Tfc23
27HEAR20252032931..2034175 [+], 1245134095217signal peptide  Tfc22
28HEAR20262034172..2034531 [+], 360134095218hypothetical protein 
29HEAR20272034547..2036064 [+], 1518134095219hypothetical protein  Tfc19
30HEAR20282036078..2036455 [-], 378134095220signal peptide 
31HEAR20292036483..2036941 [-], 459134095221hypothetical protein 
32HEAR20302036941..2037258 [-], 318134095222protease; htrA suppressor protein 
33HEAR20312037564..2039408 [+], 1845134095223hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEHaeULPAs1-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation