SecReT4
T4SS ID716
StrainTolumonas auensis DSM 9187
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_012691
Location2654915..2676431
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_012691
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Tola_24252650255..2651031 [+], 777237809166hypothetical protein 
2Tola_24262651101..2652915 [-], 1815237809167UvrD/REP helicase 
3Tola_24272652902..2654689 [-], 1788237809168hypothetical protein 
4Tola_24282654915..2655478 [+], 564237809169hypothetical protein  Tfc2
5Tola_24292655475..2656134 [+], 660237809170hypothetical protein 
6Tola_24302656147..2656875 [+], 729237809171putative secreted protein  Tfc3
7Tola_24312656857..2657447 [+], 591237809172Lytic transglycosylase catalytic  Tfc4
8Tola_24322657444..2657989 [+], 546237809173putative secreted protein  Tfc5
9Tola_24332657994..2660183 [+], 2190237809174hypothetical protein  Tfc6
10Tola_24342660180..2660929 [+], 750237809175hypothetical protein  Tfc8
11Tola_24352660930..2662300 [-], 1371237809176hypothetical protein 
12Tola_24362662464..2662841 [+], 378237809177hypothetical protein  Tfc9
13Tola_24372662838..2663071 [+], 234237809178hypothetical protein 
14Tola_24382663088..2663450 [+], 363237809179hypothetical protein 
15Tola_24392663461..2663859 [+], 399237809180hypothetical protein  Tfc11
16Tola_24402663856..2664536 [+], 681237809181putative secreted protein  Tfc12
17Tola_24412664533..2665435 [+], 903237809182putative secreted protein  Tfc13
18Tola_24422665425..2666834 [+], 1410237809183putative secreted protein  Tfc14
19Tola_24432666815..2667249 [+], 435237809184putative secreted protein  Tfc15
20Tola_24442667249..2670125 [+], 2877237809185hypothetical protein  Tfc16
21Tola_24452670141..2670899 [+], 759237809186DsbA-thioredoxin family protein 
22Tola_24462671071..2671577 [+], 507237809187DNA repair protein RadC 
23Tola_24472671713..2672213 [+], 501237809188hypothetical protein  Tfc24
24Tola_24482672210..2673142 [+], 933237809189hypothetical protein  Tfc23
25Tola_24492673153..2674550 [+], 1398237809190hypothetical protein  Tfc22
26Tola_24502674547..2674897 [+], 351237809191hypothetical protein 
27Tola_24512674911..2676431 [+], 1521237809192hypothetical protein  Tfc19
28Tola_24522676442..2676807 [-], 366237809193hypothetical protein 
29Tola_24532676835..2677293 [-], 459237809194hypothetical protein 
30Tola_24542677293..2677610 [-], 318237809195transcriptional regulator, AbrB family 
31Tola_24552677917..2679773 [+], 1857237809196Relaxase 
32Tola_24572680241..2681149 [-], 909237809197carbamate kinase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICETauDSM9187-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation