SecReT4
T4SS ID723
StrainAchromobacter xylosoxidans A8
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_014640
Location1163505..1183635
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_014640
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AXYL_01086 (arsH1)1160278..1161000 [-], 723311104292arsenic resistance protein ArsH 
2AXYL_01087 (arsC1)1160993..1161415 [-], 423311104293arsenate reductase 1 
3AXYL_010881161432..1162508 [-], 1077311104294sodium bile acid symporter family protein 1 
4AXYL_010891162519..1163013 [-], 495311104295low molecular weight phosphotyrosine protein phosphatase family protein 
5AXYL_010901163016..1163354 [-], 339311104296ArsR family transcriptional regulator 
6AXYL_01091 (pilL)1163505..1164071 [+], 567311104297PilL protein  Tfc2
7AXYL_010921164068..1164712 [+], 645311104298hypothetical protein 
8AXYL_010931164727..1165452 [+], 726311104299hypothetical protein  Tfc3
9AXYL_010941165434..1166024 [+], 591311104300transglycosylase SLT domain-containing protein 2  Tfc4
10AXYL_010951166021..1166560 [+], 540311104301hypothetical protein  Tfc5
11AXYL_010961166565..1168754 [+], 2190311104302hypothetical protein  Tfc6
12AXYL_010971168751..1169500 [+], 750311104303hypothetical protein  Tfc8
13AXYL_010981169599..1169982 [+], 384311104304hypothetical protein  Tfc9
14AXYL_010991169979..1170212 [+], 234311104305hypothetical protein 
15AXYL_011001170229..1170588 [+], 360311104306hypothetical protein 
16AXYL_011011170600..1170998 [+], 399311104307hypothetical protein  Tfc11
17AXYL_011021170995..1171687 [+], 693311104308hypothetical protein  Tfc12
18AXYL_011031171684..1172595 [+], 912311104309hypothetical protein  Tfc13
19AXYL_011041172585..1174003 [+], 1419311104310hypothetical protein  Tfc14
20AXYL_011051173984..1174433 [+], 450311104311signal recognition particle GTPase  Tfc15
21AXYL_011061174433..1177327 [+], 2895311104312type IV secretory pathway, VirB4 component  Tfc16
22AXYL_011071177341..1178105 [+], 765311104313hypothetical protein 
23AXYL_01108 (radC1)1178281..1178775 [+], 495311104314DNA repair protein RadC 1 
24AXYL_011091178993..1179385 [+], 393311104315hypothetical protein  Tfc24
25AXYL_011101179382..1180332 [+], 951311104316hypothetical protein  Tfc23
26AXYL_011111180342..1181736 [+], 1395311104317hypothetical protein  Tfc22
27AXYL_011121181733..1182104 [+], 372311104318hypothetical protein 
28AXYL_011131182118..1183635 [+], 1518311104319TraG-like family protein  Tfc19
29AXYL_011141183651..1184028 [-], 378311104320hypothetical protein 
30AXYL_011151184055..1184513 [-], 459311104321hypothetical protein 
31AXYL_011161184513..1184830 [-], 318311104322AbrB family transcriptional regulator 
32AXYL_011171185130..1187007 [+], 1878311104323hypothetical protein 
33AXYL_011181187091..1187228 [+], 138311104324hypothetical protein 
34AXYL_011191187262..1187519 [+], 258311104325copper-translocating P-type ATPase 1 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEAxyA8-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation