SecReT4
T4SS ID728
StrainAcidovorax sp. JS42
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008782
Location1327178..1354704
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_008782
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ajs_12431322310..1323404 [+], 1095121593648signal peptidase II 
2Ajs_12451323801..1325684 [-], 1884121593649relaxase 
3Ajs_12461325914..1326300 [+], 387121593650AbrB family transcriptional regulator 
4Ajs_12471326300..1326758 [+], 459121593651hypothetical protein 
5Ajs_12481326785..1327162 [+], 378121593652hypothetical protein 
6Ajs_12491327178..1328695 [-], 1518121593653hypothetical protein  Tfc19
7Ajs_12501328710..1329069 [-], 360121593654hypothetical protein 
8Ajs_12511329066..1330460 [-], 1395121593655hypothetical protein  Tfc22
9Ajs_12521330470..1331417 [-], 948121593656hypothetical protein  Tfc23
10Ajs_12531331414..1331860 [-], 447121593657hypothetical protein  Tfc24
11Ajs_12541332024..1332518 [-], 495121593658DNA repair protein RadC 
12Ajs_12551332698..1333462 [-], 765121593659hypothetical protein 
13Ajs_12561333487..1336378 [-], 2892121593660hypothetical protein  Tfc16
14Ajs_12571336378..1336827 [-], 450121593661hypothetical protein  Tfc15
15Ajs_12581336808..1338238 [-], 1431121593662hypothetical protein  Tfc14
16Ajs_12591338228..1339136 [-], 909121593663hypothetical protein  Tfc13
17Ajs_12601339133..1339825 [-], 693121593664hypothetical protein  Tfc12
18Ajs_12611339822..1340220 [-], 399121593665hypothetical protein  Tfc11
19Ajs_12621340232..1340591 [-], 360121593666hypothetical protein 
20Ajs_12631340608..1340841 [-], 234121593667hypothetical protein 
21Ajs_12641340838..1341221 [-], 384121593668hypothetical protein  Tfc9
22Ajs_12651341425..1341895 [+], 471121593669DNA-binding domain-containing protein 
23Ajs_12661341892..1342467 [+], 576121593670hypothetical protein 
24Ajs_12671342485..1343399 [+], 915121593671ATPase central domain-containing protein 
25Ajs_12681343396..1343866 [+], 471121593672hypothetical protein 
26Ajs_12691343863..1344363 [+], 501121593673hypothetical protein 
27Ajs_12701344363..1345265 [+], 903121593674hypothetical protein 
28Ajs_12711345304..1346029 [+], 726121593675hypothetical protein 
29Ajs_12721346039..1348663 [+], 2625121593676hypothetical protein 
30Ajs_12731348704..1349453 [-], 750121593677hypothetical protein  Tfc8
31Ajs_12741349450..1351642 [-], 2193121593678hypothetical protein  Tfc6
32Ajs_12751351647..1352195 [-], 549121593679hypothetical protein  Tfc5
33Ajs_12761352192..1352782 [-], 591121593680lytic transglycosylase catalytic subunit  Tfc4
34Ajs_12771352764..1353489 [-], 726121593681hypothetical protein  Tfc3
35Ajs_12781353506..1354141 [-], 636121593682hypothetical protein 
36Ajs_12791354138..1354704 [-], 567121593683hypothetical protein  Tfc2
37Ajs_12801354831..1355193 [+], 363121593684ArsR family transcriptional regulator 
38Ajs_12811355196..1355690 [+], 495121593685protein tyrosine phosphatase 
39Ajs_12821355701..1356777 [+], 1077121593686arsenical-resistance protein 
40Ajs_12831356794..1357216 [+], 423121593687arsenate reductase 
41Ajs_12841357200..1357931 [+], 732121593688NADPH-dependent FMN reductase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEAciJS42-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation