SecReT4
T4SS ID737
StrainPseudomonas putida W619
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_010501
Location3640491..3646256; 3664833..3675699
NameTfc
FunctionNA
ClassificationType IVC; Type G
insolico This T4SS is identified in this study.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111010
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100110

The information of T4SS components from NC_010501
Region 1: 3640491..3646256
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PputW619_32963638161..3638691 [+], 531170722462hypothetical protein 
2PputW619_32973638759..3639016 [+], 258170722463hypothetical protein 
3PputW619_32983639084..3639578 [+], 495170722464DNA repair protein RadC 
4PputW619_32993639644..3640360 [+], 717170722465hypothetical protein 
5PputW619_33003640491..3641006 [+], 516170722466type IV B pilus protein  Tfc2
6PputW619_33013641003..3641674 [+], 672170722467hypothetical protein 
7PputW619_33023641685..3642404 [+], 720170722468hypothetical protein  Tfc3
8PputW619_33033642386..3642940 [+], 555170722469lytic transglycosylase  Tfc4
9PputW619_33043642937..3643356 [+], 420170722470hypothetical protein  Tfc5
10PputW619_33053643366..3645489 [+], 2124170722471hypothetical protein  Tfc6
11PputW619_33063645588..3646256 [+], 669170722472hypothetical protein  Tfc8
12PputW619_33073646633..3647175 [-], 543170722473cytochrome B561 
13PputW619_33083647343..3648707 [-], 1365170722474integral membrane sensor signal transduction histidine kinase 
14PputW619_33093648704..3649366 [-], 663170722475two component transcriptional regulator 
15PputW619_33103649369..3650010 [-], 642170722476hypothetical protein 
16PputW619_33113650007..3650813 [-], 807170722477short chain dehydrogenase 
 
Region 2: 3664833..3675699
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PputW619_33203661023..3662033 [+], 1011170722486proline racemase 
2PputW619_33213662167..3663486 [+], 1320170722487major facilitator transporter 
3PputW619_33223663871..3664206 [+], 336170722488hypothetical protein 
4PputW619_33233664193..3664432 [+], 240170722489hypothetical protein 
5PputW619_33243664448..3664825 [+], 378170722490hypothetical protein 
6PputW619_33253664833..3665234 [+], 402170722491hypothetical protein  Tfc11
7PputW619_33263665231..3665872 [+], 642170722492hypothetical protein  Tfc12
8PputW619_33273665869..3666675 [+], 807170722493hypothetical protein  Tfc13
9PputW619_33283666665..3668173 [+], 1509170722494hypothetical protein  Tfc14
10PputW619_33293668136..3668555 [+], 420170722495hypothetical protein  Tfc15
11PputW619_33303668555..3671296 [+], 2742170722496hypothetical protein  Tfc16
12PputW619_33313671517..3672494 [+], 978170722497hypothetical protein  Tfc23
13PputW619_33323672494..3673849 [+], 1356170722498hypothetical protein  Tfc22
14PputW619_33333673846..3674151 [+], 306170722499hypothetical protein 
15PputW619_33343674161..3675699 [+], 1539170722500hypothetical protein  Tfc19
16PputW619_33353676517..3676882 [+], 366170722501hypothetical protein 
17PputW619_33363677557..3678495 [+], 939170722502hypothetical protein 
18PputW619_33373678582..3678947 [-], 366170722503transcriptional regulator 
19PputW619_33383679074..3679268 [-], 195170722504hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010501