SecReT4
T4SS ID738
StrainAlicycliphilus denitrificans K601
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015422
Location1874184..1880163; 1895984..1914333
NameTfc
FunctionNA
ClassificationType IVC; Type G
insolico This T4SS is identified in this study.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_015422
Region 1: 1874184..1880163
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Alide2_17721869543..1869809 [+], 267330824372hypothetical protein 
2Alide2_17731869806..1870522 [+], 717330824373ABC transporter 
3Alide2_17741870689..1871975 [+], 1287330824374hypothetical protein 
4Alide2_17751871972..1872679 [+], 708330824375hypothetical protein 
5Alide2_17761872692..1873531 [+], 840330824376hypothetical protein 
6Alide2_17781874184..1874744 [+], 561330824377integrating conjugative element protein PilL  Tfc2
7Alide2_17791874741..1875388 [+], 648330824378hypothetical protein 
8Alide2_17801875398..1876117 [+], 720330824379integrating conjugative element protein  Tfc3
9Alide2_17811876102..1876722 [+], 621330824380lytic transglycosylase catalytic subunit  Tfc4
10Alide2_17821876719..1877252 [+], 534330824381integrating conjugative element protein  Tfc5
11Alide2_17831877261..1879417 [+], 2157330824382conjugative coupling factor TraD  Tfc6
12Alide2_17841879414..1880163 [+], 750330824383integrating conjugative element membrane protein  Tfc8
13Alide2_17851880209..1882836 [-], 2628330824384hypothetical protein 
 
Region 2: 1895984..1914333
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Alide2_17901891555..1892541 [-], 987330824389AAA ATPase 
2Alide2_17911892622..1895501 [-], 2880330824390SNF2-like protein 
3Alide2_17921895560..1895760 [-], 201330824391excisionase family DNA binding domain-containing protein 
4Alide2_17931895984..1896349 [+], 366330824392hypothetical protein  Tfc9
5Alide2_17941896346..1896585 [+], 240330824393integrating conjugative element protein 
6Alide2_17951896608..1896976 [+], 369330824394integrating conjugative element membrane protein 
7Alide2_17961896989..1897399 [+], 411330824395conjugative transfer region protein  Tfc11
8Alide2_17971897396..1898088 [+], 693330824396integrating conjugative element protein  Tfc12
9Alide2_17981898085..1898999 [+], 915330824397integrating conjugative element protein  Tfc13
10Alide2_17991898989..1900422 [+], 1434330824398integrating conjugative element protein  Tfc14
11Alide2_18001900403..1900837 [+], 435330824399conjugative transfer region lipoprotein  Tfc15
12Alide2_18011900837..1903725 [+], 2889330824400conjugative transfer ATPase  Tfc16
13Alide2_18021903739..1904482 [+], 744330824401hypothetical protein 
14Alide2_18031904678..1905172 [+], 495330824402DNA repair protein RadC 
15Alide2_18041905395..1905871 [+], 477330824403hypothetical protein 
16Alide2_18051905868..1908831 [+], 2964330824404N-6 DNA methylase 
17Alide2_18061908981..1909499 [+], 519330824405hypothetical protein 
18Alide2_18071909643..1910086 [+], 444330824406integrating conjugative element protein  Tfc24
19Alide2_18081910083..1911027 [+], 945330824407integrating conjugative element protein  Tfc23
20Alide2_18091911038..1912444 [+], 1407330824408integrating conjugative element protein  Tfc22
21Alide2_18101912441..1912794 [+], 354330824409hypothetical protein 
22Alide2_18111912810..1914333 [+], 1524330824410hypothetical protein  Tfc19
23Alide2_18121914350..1914718 [-], 369330824411hypothetical protein 
24Alide2_18131914948..1915706 [+], 759330824412hypothetical protein 
25Alide2_18141915699..1916619 [+], 921330824413hypothetical protein 
26Alide2_18151916822..1918666 [+], 1845330824414integrating conjugative element relaxase 
27Alide2_18161918693..1918992 [-], 300330824415helix-turn-helix domain-containing protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015422