SecReT4
T4SS ID739
StrainAlicycliphilus denitrificans K601
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015422
Location2009437..2023471; 2055403..2060107
NameTfc
FunctionNA
ClassificationType IVC; Type G
insolico This T4SS is identified in this study.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_015422
Region 1: 2009437..2023471
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Alide2_19022004636..2005292 [+], 657330824493hypothetical protein 
2Alide2_19032005360..2006475 [+], 1116330824494hypothetical protein 
3Alide2_19042006587..2006892 [+], 306330824495hypothetical protein 
4Alide2_19052006995..2009277 [+], 2283330824496DEAD/DEAH box helicase 
5Alide2_19062009437..2010048 [+], 612330824497integrating conjugative element protein PilL  Tfc2
6Alide2_19072010045..2010689 [+], 645330824498hypothetical protein 
7Alide2_19082010699..2011430 [+], 732330824499integrating conjugative element protein  Tfc3
8Alide2_19092011415..2012014 [+], 600330824500lytic transglycosylase catalytic subunit  Tfc4
9Alide2_19102012011..2012577 [+], 567330824501integrating conjugative element protein  Tfc5
10Alide2_19112012598..2014757 [+], 2160330824502conjugative coupling factor TraD  Tfc6
11Alide2_19122014754..2015503 [+], 750330824503integrating conjugative element membrane protein  Tfc8
12Alide2_19132015617..2016024 [+], 408330824504hypothetical protein  Tfc9
13Alide2_19142016021..2016260 [+], 240330824505integrating conjugative element protein 
14Alide2_19152016282..2016659 [+], 378330824506integrating conjugative element membrane protein 
15Alide2_19162016672..2017100 [+], 429330824507conjugative transfer region protein  Tfc11
16Alide2_19172017097..2017789 [+], 693330824508integrating conjugative element protein  Tfc12
17Alide2_19182017786..2018715 [+], 930330824509integrating conjugative element protein  Tfc13
18Alide2_19192018705..2020174 [+], 1470330824510integrating conjugative element protein  Tfc14
19Alide2_19202020155..2020589 [+], 435330824511conjugative transfer region lipoprotein  Tfc15
20Alide2_19212020589..2023471 [+], 2883330824512conjugative transfer ATPase  Tfc16
21Alide2_19222023482..2024237 [+], 756330824513DSBA oxidoreductase 
22Alide2_19232024431..2025018 [+], 588330824514hypothetical protein 
23Alide2_19242025193..2025801 [+], 609330824515TetR family transcriptional regulator 
24Alide2_19252025798..2026949 [+], 1152330824516RND family efflux transporter MFP subunit 
25Alide2_19262026946..2028151 [+], 1206330824517hypothetical protein 
 
Region 2: 2055403..2060107
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Alide2_19512050561..2050836 [-], 276330824541mercuric transport periplasmic protein 
2Alide2_19522050850..2051200 [-], 351330824542mercuric transport protein MerT 
3Alide2_19532051272..2051706 [+], 435330824543MerR family transcriptional regulator 
4Alide2_19562055403..2055849 [+], 447330824544integrating conjugative element protein  Tfc24
5Alide2_19572055846..2056796 [+], 951330824545integrating conjugative element protein  Tfc23
6Alide2_19582056807..2058207 [+], 1401330824546integrating conjugative element protein  Tfc22
7Alide2_19592058207..2058566 [+], 360330824547hypothetical protein 
8Alide2_19602058590..2060107 [+], 1518330824548hypothetical protein  Tfc19
9Alide2_19612060108..2060479 [-], 372330824549hypothetical protein 
10Alide2_19622060602..2061066 [-], 465330824550hypothetical protein 
11Alide2_19632061066..2061383 [-], 318330824551AbrB family transcriptional regulator 
12Alide2_19642061697..2063562 [+], 1866330824552integrating conjugative element relaxase 
13Alide2_19652063589..2063894 [-], 306330824553helix-turn-helix domain-containing protein 
14Alide2_19662064013..2064633 [+], 621330824554LysR family transcriptional regulator 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015422