SecReT4
T4SS ID74
StrainIncP-1 plasmid pKJK5
Repliconplasmid pKJK5 [Browse all T4SS(s) in this replicon]
AccessionNC_008272
Location3707..15944; 39706..42143
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_008272
Region 1: 3707..15944
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pKJK5_1 (trfA)1315..2538 [-], 1224111038053replication initiation protein 
2pKJK5_2 (ssb)2590..2931 [-], 342111038054single strand DNA binding protein 
3pKJK5_3 (trbA)3043..3417 [+], 375111038055transcriptional regulator protein 
4pKJK5_4 (trbB)3707..4669 [+], 963111038056TrbB protein  TrbB
5pKJK5_5 (trbC)4683..5147 [+], 465111038057putative prepilin  TrbC
6pKJK5_6 (trbD)5151..5462 [+], 312111038058TrbD protein  TrbD
7pKJK5_7 (trbE)5459..8017 [+], 2559111038059TrbE protien  TrbE
8pKJK5_8 (trbF)8014..8787 [+], 774111038060TrbF protein  TrbF
9pKJK5_9 (trbG)8805..9698 [+], 894111038061TrbG protein  TrbG
10pKJK5_10 (trbH)9701..10156 [+], 456111038062TrbH protein  TrbH
11pKJK5_11 (trbI)10160..11563 [+], 1404111038063TrbI protein  TrbI
12pKJK5_12 (trbJ)11582..12352 [+], 771111038064TrbJ protein  TrbJ
13pKJK5_13 (trbK)12362..12535 [+], 174111038065TrbK protein  TrbK
14pKJK5_1412520..12747 [+], 228111038066hypothetical protein 
15pKJK5_15 (trbL)12759..14675 [+], 1917111038067TrbL protein  TrbL
16pKJK5_16 (trbM)14711..15298 [+], 588111038068TrbM protein 
17pKJK5_17 (trbN)15315..15944 [+], 630111038069TrbN protein  TrbN
18pKJK5_18 (trbO)15973..16242 [+], 270111038070TrbO protein 
19pKJK5_19 (trbP)16239..16937 [+], 699111038071TrbP protein 
20pKJK5_20 (upf30.5)16952..17383 [+], 432111038072putative outer membrane protein 
21pKJK5_2117426..17839 [+], 414111038073putative major outer membrane lipoprotein 
22pKJK5_2217865..18833 [+], 969111038074hypothetical protein 
23pKJK5_23 (parA)18816..19421 [-], 606111038075plasmid stablization protein ParA, resolvase 
24pKJK5_2419597..20139 [-], 543111038076putative transposase 
25pKJK5_2520145..20540 [-], 396111038077hypothetical protein 
26pKJK5_2620537..20788 [-], 252111038078putative transcriptional regulator 
 
Region 2: 39706..42143
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pKJK5_41 (traD)37228..37611 [-], 384111038093TraD protein 
2pKJK5_42 (traE)37616..39691 [-], 2076111038094putative DNA topoisomerase 
3pKJK5_43 (traF)39706..40242 [-], 537111038095TraF protein  TraF
4pKJK5_44 (traG)40239..42143 [-], 1905111038096TraG protein  TraG
5pKJK5_46 (traI)42140..44362 [-], 2223111038097TraI protein 
6pKJK5_45 (traH)42454..42816 [-], 363111038098TraH protein 
7pKJK5_47 (traJ)44394..44768 [-], 375111038099oriT binding protein 
8pKJK5_48 (traK)45108..45497 [+], 390111038100TraK protein 
9pKJK5_49 (traL)45497..46222 [+], 726111038101TraL protein 
10pKJK5_50 (traM)46222..46662 [+], 441111038102traM protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008272