SecReT4
T4SS ID740
StrainPseudomonas putida S16
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_015733
Location2630368..2651382
NameTfc
FunctionNA
ClassificationType IVC; Type G
insolico This T4SS is identified in this study.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111010
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number011111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100110

The information of T4SS components from NC_015733
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PPS_23332626757..2626951 [+], 195339487246hypothetical protein 
2PPS_23342627079..2627444 [+], 366339487247putative transcriptional regulator 
3PPS_23352627531..2628469 [-], 939339487248hypothetical protein 
4PPS_23362629181..2629585 [-], 405339487249hypothetical protein 
5PPS_23372630368..2631906 [-], 1539339487250hypothetical protein  Tfc19
6PPS_23382631916..2632164 [-], 249339487251hypothetical protein 
7PPS_23392632218..2633537 [-], 1320339487252hypothetical protein  Tfc22
8PPS_23402633573..2634334 [-], 762339487253hypothetical protein  Tfc23
9PPS_23412634767..2637508 [-], 2742339487254type IV secretory pathway VirB4 components-like protein  Tfc16
10PPS_23422637508..2637927 [-], 420339487255hypothetical protein  Tfc15
11PPS_23432637890..2639398 [-], 1509339487256hypothetical protein  Tfc14
12PPS_23442639388..2640194 [-], 807339487257hypothetical protein  Tfc13
13PPS_23452640194..2640874 [-], 681339487258hypothetical protein  Tfc12
14PPS_23462640829..2641128 [-], 300339487259hypothetical protein  Tfc11
15PPS_23472641238..2641495 [-], 258339487260hypothetical protein 
16PPS_23482641631..2641870 [-], 240339487261hypothetical protein 
17PPS_23492642484..2643386 [-], 903339487262putative AraC family transcriptional regulator 
18PPS_23502643516..2644259 [+], 744339487263short-chain dehydrogenase/reductase SDR 
19PPS_23512644277..2644678 [+], 402339487264glyoxalase 
20PPS_23522644660..2645652 [+], 993339487265hypothetical protein 
21PPS_23532645713..2646441 [-], 729339487266hypothetical protein  Tfc8
22PPS_23542646477..2648603 [-], 2127339487267hypothetical protein  Tfc6
23PPS_23552648613..2648987 [-], 375339487268hypothetical protein  Tfc5
24PPS_23562649071..2649538 [-], 468339487269lytic transglycosylase  Tfc4
25PPS_23572649607..2650323 [-], 717339487270hypothetical protein  Tfc3
26PPS_23582650334..2651002 [-], 669339487271hypothetical protein 
27PPS_23592650999..2651382 [-], 384339487272type IV B pilus protein  Tfc2
28PPS_23602651648..2652364 [-], 717339487273hypothetical protein 
29PPS_23612652424..2652918 [-], 495339487274DNA repair protein RadC 
30PPS_23622652980..2653237 [-], 258339487275hypothetical protein 
31PPS_23632653298..2653699 [-], 402339487276hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_015733