SecReT4
T4SS ID743
StrainSalmonella enterica subsp. enterica serovar Typhi str. Ty2
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_004631
Location4408518..4442747
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number001111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_004631
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1t42354406040..4406489 [+], 45029144495hypothetical protein 
2t42364406570..4406788 [+], 21929144496hypothetical protein 
3t4237 (ssb)4406801..4407337 [+], 53729144497single-stranded DNA-binding protein 
4t4239 (pilL)4408518..4409762 [+], 124529144498hypothetical protein  Tfc2
5t4240 (pilM)4409765..4410184 [+], 42029144499hypothetical protein 
6t4243 (pilO)4411887..4413182 [+], 129629144500pilus assembly protein 
7t4244 (pilP)4413280..4413750 [+], 47129144501pilus assembly protein 
8t4245 (pilQ)4413760..4415475 [+], 171629144502nucleotide-binding protein 
9t4246 (pilR)4415472..4416557 [+], 108629144503hypothetical protein 
10t4247 (pilS)4416557..4417192 [+], 63629144504prepilin 
11t4248 (pilT)4417202..4417678 [+], 47729144505hypothetical protein 
12t4249 (pilU)4417675..4418337 [+], 66329144506prepilin peptidase 
13t4250 (pilV)4418334..4419641 [+], 130829144507prepilin 
14t4252 (rci)4419989..4421140 [+], 115229144508shufflon-specific DNA recombinase 
15t4253 (pilK)4421237..4421704 [+], 46829144509hypothetical protein 
16t42544421916..4422791 [+], 87629144510hypothetical protein 
17t42554423298..4424212 [+], 91529144511hypothetical protein 
18t42564424231..4424971 [+], 74129144512hypothetical protein  Tfc3
19t42574425085..4425636 [+], 55229144513hypothetical protein  Tfc4
20t42584425672..4426172 [+], 50129144514hypothetical protein  Tfc5
21t42594426182..4426751 [+], 57029144515hypothetical protein 
22t42604426771..4428861 [+], 209129144516hypothetical protein  Tfc6
23t42614428858..4429616 [+], 75929144517hypothetical protein  Tfc8
24t42624429835..4430107 [+], 27329144518hypothetical protein  Tfc9
25t42634430107..4430346 [+], 24029144519hypothetical protein 
26t42644430376..4430738 [+], 36329144520hypothetical protein 
27t42654431119..4431772 [+], 65429144521hypothetical protein  Tfc12
28t42664431772..4432671 [+], 90029144522hypothetical protein  Tfc13
29t42684432661..4434139 [+], 147929144523hypothetical protein  Tfc14
30t42674434132..4434575 [+], 44429144524lipoprotein  Tfc15
31t42694434572..4434991 [+], 42029144525hypothetical protein 
32t42704434988..4437411 [+], 242429144526hypothetical protein  Tfc16
33t42714437566..4437952 [+], 38729144527hypothetical protein 
34t42724438107..4438499 [+], 39329144528hypothetical protein  Tfc24
35t42734438496..4439464 [+], 96929144529hypothetical protein  Tfc23
36t42744439479..4440909 [+], 143129144530hypothetical protein  Tfc22
37t42754440906..4441238 [+], 33329144531hypothetical protein 
38t42764441242..4442747 [+], 150629144532hypothetical protein  Tfc19
39t42774442986..4444233 [+], 124829144533hypothetical protein 
40t42784444245..4444859 [+], 61529144534hypothetical protein 
41t42794445070..4445612 [-], 54329144535hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICESenTy2-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation