SecReT4
T4SS ID759
StrainPseudomonas aeruginosa LESB58
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011770
Location2842975..2870430
NameTfc
Functionconjugation
ClassificationType IVC; Type G
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number011111001
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number111010100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number100111

The information of T4SS components from NC_011770
Click the image to have a larger view
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PLES_264012838131..2839003 [+], 8732188913672-dehydro-3-deoxyphosphooctonate aldolase 
2PLES_264212839054..2840925 [-], 1872218891368Relaxase 
3PLES_264312841242..2841868 [+], 627218891369hypothetical protein 
4PLES_264412841881..2842513 [+], 633218891370hypothetical protein 
5PLES_264512842598..2842963 [+], 366218891371hypothetical protein 
6PLES_264612842975..2844495 [-], 1521218891372hypothetical protein  Tfc19
7PLES_264712844511..2844882 [-], 372218891373hypothetical protein 
8PLES_264812844879..2846276 [-], 1398218891374hypothetical protein  Tfc22
9PLES_264912846286..2847233 [-], 948218891375hypothetical protein  Tfc23
10PLES_265012847230..2847622 [-], 393218891376hypothetical protein  Tfc24
11PLES_265112847839..2848333 [-], 495218891377RadC family DNA repair protein 
12PLES_265212848516..2849301 [-], 786218891378hypothetical protein 
13PLES_265312849315..2852200 [-], 2886218891379hypothetical protein  Tfc16
14PLES_265412852621..2854039 [-], 1419218891380hypothetical protein  Tfc14
15PLES_265512854937..2855629 [-], 693218891381hypothetical protein  Tfc12
16PLES_265612855626..2855958 [-], 333218891382hypothetical protein  Tfc11
17PLES_265712856049..2856408 [-], 360218891383hypothetical protein  Tfc10
18PLES_265812856425..2856658 [-], 234218891384hypothetical protein 
19PLES_265912856655..2857038 [-], 384218891385plasmid Ignore, RAQPRD family  Tfc9
20PLES_266012857242..2857712 [+], 471218891386excisionase family DNA binding domain 
21PLES_266112857709..2858284 [+], 576218891387hypothetical protein 
22PLES_266212858302..2859216 [+], 915218891388AAA ATPase 
23PLES_266312859680..2860180 [+], 501218891389hypothetical protein 
24PLES_266412860180..2861082 [+], 903218891390hypothetical protein 
25PLES_266512861121..2861846 [+], 726218891391hypothetical protein 
26PLES_266612861898..2864480 [+], 2583218891392chromosome segregation ATPase 
27PLES_266712865267..2867456 [-], 2190218891393hypothetical protein  Tfc6
28PLES_266812867461..2867964 [-], 504218891394hypothetical protein  Tfc5
29PLES_266912868006..2868575 [-], 570218891395hypothetical protein  Tfc4
30PLES_267012868578..2869315 [-], 738218891396hypothetical protein  Tfc3
31PLES_267112869328..2869972 [-], 645218891397putative secreted protein 
32PLES_267212869969..2870430 [-], 462218891398putative secreted protein  Tfc2
33PLES_267312870707..2872986 [-], 2280218891399hypothetical protein 
34PLES_267412873123..2873428 [-], 306218891400hypothetical protein 
35PLES_267512873518..2873838 [-], 321218891401hypothetical protein 
36PLES_267612873889..2874998 [-], 1110218891402hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICEPaeLESB58-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673] in_silico
 
in_silico This literature contains bioinformatics investigation