SecReT4
T4SS ID761
StrainPseudomonas syringae pv. tomato str. DC3000
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_004578
Location916412..953524
NameTfc
FunctionNA
ClassificationType IVC; Type G
insolico This T4SS is identified in this study.

T4SS components
ComponentTfc1Tfc2Tfc3Tfc4Tfc5Tfc6Tfc7Tfc8Tfc9
Number000001011
ComponentTfc10Tfc11Tfc12Tfc13Tfc14Tfc15Tfc16Tfc17Tfc18
Number111111100
ComponentTfc19Tfc20Tfc21Tfc22Tfc23Tfc24
Number000111

The information of T4SS components from NC_004578
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PSPTO_0842911777..912136 [+], 36028868066ISPsy5, Orf1 
2PSPTO_0844912397..913374 [-], 97828868067ISPssy, transposase 
3PSPTO_0847916047..916415 [-], 36928868068hypothetical protein 
4PSPTO_0848916412..917785 [-], 137428868069hypothetical protein  Tfc22
5PSPTO_0849917806..918744 [-], 93928868070hypothetical protein  Tfc23
6PSPTO_0850918744..919160 [-], 41728868071hypothetical protein  Tfc24
7PSPTO_0851919701..920189 [-], 48928868072hypothetical protein 
8PSPTO_0852 (hopAJ1)920451..921692 [-], 124228868073type III helper protein HopAJ1 
9PSPTO_5621923360..923584 [+], 225281494526hypothetical protein 
10PSPTO_0853923620..924033 [+], 41428868074dnaK suppressor protein 
11PSPTO_0854924071..924292 [+], 22228868075hypothetical protein 
12PSPTO_0855925982..927079 [+], 109828868076ParA family protein 
13PSPTO_0856927082..927900 [+], 81928868077hypothetical protein 
14PSPTO_0857928074..928778 [-], 70528868078hypothetical protein 
15PSPTO_0858928775..929074 [-], 30028868079hypothetical protein 
16PSPTO_0859929071..931740 [-], 267028868080hypothetical protein  Tfc16
17PSPTO_0860932028..932483 [-], 45628868081hypothetical protein  Tfc15
18PSPTO_0861932461..933957 [-], 149728868082hypothetical protein  Tfc14
19PSPTO_0862933947..934870 [-], 92428868083hypothetical protein  Tfc13
20PSPTO_0863934867..935535 [-], 66928868084hypothetical protein  Tfc12
21PSPTO_0864935655..936464 [-], 81028868085ISPsy4, transposition helper protein 
22PSPTO_0865936461..937483 [-], 102328868086ISPsy4, transposase 
23PSPTO_0866937527..937892 [-], 36628868087hypothetical protein  Tfc11
24PSPTO_0867937908..938276 [-], 36928868088hypothetical protein  Tfc10
25PSPTO_0868938296..938445 [-], 15028868089hypothetical protein 
26PSPTO_0869938532..938897 [-], 36628868090hypothetical protein  Tfc9
27PSPTO_0871939884..941068 [+], 118528868092macrolide efflux protein 
28PSPTO_0873942019..943119 [+], 110128868093amidinotransferase family protein 
29PSPTO_0874943206..944459 [+], 125428868094nikkomycin biosynthesis domain protein 
30PSPTO_0875944512..945756 [+], 124528868095hypothetical protein 
31PSPTO_0876 (hopD1)946222..948339 [+], 211828868096type III effector HopD1 
32PSPTO_0877 (hopQ1-1)948455..949798 [-], 134428868097type III effector HopQ1-1 
33PSPTO_0878949832..950149 [+], 31828868098hypothetical protein 
34PSPTO_0879950387..951844 [-], 145828868099hypothetical protein 
35PSPTO_0880951854..952603 [-], 75028868100hypothetical protein  Tfc8
36PSPTO_0881952643..953524 [-], 88228868101hypothetical protein  Tfc6
37PSPTO_0882953552..954085 [-], 53428868102hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_004578