SecReT4
T4SS ID772
StrainPolaromonas sp. JS666
Repliconplasmid 2 [Browse all T4SS(s) in this replicon]
AccessionNC_007950
Location207754..224107
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number00001

The information of T4SS components from NC_007950
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Bpro_5451203078..204748 [-], 167191791253type II and III secretion system protein 
2Bpro_5452204748..205647 [-], 90091791254hypothetical protein 
3Bpro_5453206044..206472 [-], 42991791255hypothetical protein 
4Bpro_5454206474..207748 [-], 127591791256hypothetical protein 
5Bpro_5455207754..209022 [-], 126991791257conjugation TrbI-like protein  TrbI
6Bpro_5456209012..209818 [-], 80791791258conjugal transfer protein TrbG/VirB9/CagX  TrbG
7Bpro_5457209815..210585 [-], 77191791259Type IV secretory pathway component VirB8-like  TrbF
8Bpro_5458210630..211013 [-], 38491791260hypothetical protein 
9Bpro_5459211014..211505 [-], 49291791261hypothetical protein 
10Bpro_5460211518..211796 [-], 27991791262hypothetical protein 
11Bpro_5461211831..213564 [-], 173491791263AAA ATPase, central region 
12Bpro_5462214194..214436 [-], 24391791264hypothetical protein 
13Bpro_5463214433..215689 [-], 125791791265hypothetical protein 
14Bpro_5464215686..216561 [-], 87691791266hypothetical protein  TrbJ
15Bpro_5465216575..219127 [-], 255391791267Type IV secretory pathway VirB4 components-like  TrbE
16Bpro_5466219121..219420 [-], 30091791268type IV secretory pathway, VirB3-like  TrbD
17Bpro_5467219427..219792 [-], 36691791269hypothetical protein  TrbC
18Bpro_5468219897..220871 [-], 97591791270type II secretion system protein E  TrbB
19Bpro_5469220959..221603 [-], 64591791271hypothetical protein 
20Bpro_5470221600..221971 [-], 37291791272hypothetical protein 
21Bpro_5471222200..224107 [-], 190891791273hypothetical protein  TraG
22Bpro_5472224110..225945 [-], 183691791274hypothetical protein 
23Bpro_5473226031..226624 [-], 59491791275hypothetical protein 
24Bpro_5474226628..226933 [-], 30691791276hypothetical protein 
25Bpro_5475226974..227351 [-], 37891791277hypothetical protein 
26Bpro_5476227939..229000 [+], 106291791278tRNA 2-selenouridine synthase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Mattes TE; Alexander AK; Richardson PM; Munk AC; Han CS; Stothard P; Coleman NV (2008). The genome of Polaromonas sp. strain JS666: insights into the evolution of a hydrocarbon- and xenobiotic-degrading bacterium, and features of relevance to biotechnology. Appl Environ Microbiol. 74(20):6405-16. [PudMed:18723656]