SecReT4
T4SS ID78
StrainAcidovorax sp. JS42
Repliconplasmid pAOVO02 [Browse all T4SS(s) in this replicon]
AccessionNC_008766
Location11889..23824; 58677..61114
NameTrb
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111111
ComponentTrbKTrbLTrbNTraFTraG
Number11111

The information of T4SS components from NC_008766
Region 1: 11889..23824
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ajs_42537308..8171 [+], 864121582559type II DNA restriction endonuclease R.NGOI 
2Ajs_42548338..8544 [+], 207121582560hypothetical protein 
3Ajs_42558608..8841 [-], 234121582561hypothetical protein 
4Ajs_42579010..9540 [-], 531121582562hypothetical protein 
5Ajs_42589619..10293 [-], 675121582563phage DNA methylase 
6Ajs_425910449..10880 [-], 432121582564hypothetical protein 
7Ajs_426010896..11594 [-], 699121582565conjugal transfer protein TrbP 
8Ajs_426111594..11860 [-], 267121582566hypothetical protein 
9Ajs_426211889..12524 [-], 636121582567conjugal transfer protein TrbN  TrbN
10Ajs_426312538..13122 [-], 585121582568conjugal transfer protein TrbM 
11Ajs_426413139..14872 [-], 1734121582569TrbL/VirB6 plasmid conjugal transfer protein  TrbL
12Ajs_426514883..15110 [-], 228121582570entry exclusion protein TrbK  TrbK
13Ajs_426615120..15884 [-], 765121582571conjugal transfer protein TrbJ  TrbJ
14Ajs_426715902..17320 [-], 1419121582572conjugal transfer protein TrbI  TrbI
15Ajs_426817325..17813 [-], 489121582573conjugal transfer protein TrbH  TrbH
16Ajs_426917816..18715 [-], 900121582574conjugal transfer protein TrbG  TrbG
17Ajs_427018733..19515 [-], 783121582575conjugal transfer protein TrbF  TrbF
18Ajs_427119512..22070 [-], 2559121582576conjugal transfer protein TrbE  TrbE
19Ajs_427222067..22378 [-], 312121582577conjugal transfer protein TrbD  TrbD
20Ajs_427322382..22846 [-], 465121582578conjugal transfer protein TrbC  TrbC
21Ajs_427422859..23824 [-], 966121582579conjugal transfer ATPase TrbB  TrbB
22Ajs_427524135..24497 [-], 363121582580conjugal transfer protein TrbA 
23Ajs_427624606..24944 [+], 339121582581single-strand binding protein 
24Ajs_427724992..26215 [+], 1224121582582TrfA family protein 
25Ajs_427826399..26614 [-], 216121582583hypothetical protein 
 
Region 2: 58677..61114
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ajs_431154011..54736 [-], 726121582608conjugal transfer protein TraL 
2Ajs_431254736..55155 [-], 420121582609TraK protein of DNA transfer system 
3Ajs_431355518..55739 [+], 222121582610hypothetical protein 
4Ajs_431455744..56115 [+], 372121582611conjugal transfer relaxosome component TraJ 
5Ajs_431556150..58408 [+], 2259121582612conjugal transfer relaxase TraI 
6Ajs_431658405..58680 [+], 276121582613putative entry/exclusion protein TrbK 
7Ajs_431758677..60581 [+], 1905121582614conjugal transfer coupling protein TraG  TraG
8Ajs_431860578..61114 [+], 537121582615conjugal transfer peptidase TraF  TraF
9Ajs_431961129..63192 [+], 2064121582616DNA topoisomerase III 
10Ajs_432063217..63609 [+], 393121582617conjugal transfer protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_008766