SecReT4
T4SS ID786
StrainAgrobacterium vitis S4
Repliconplasmid pAtS4a [Browse all T4SS(s) in this replicon]
AccessionNC_011986
Location10420..23412
NameVirB
FunctionNA
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number210111011
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_011986
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Avi_9806 (parA)5586..6287 [-], 702222102335chromosome partitioning protein 
2Avi_98076996..7397 [+], 402222102336mob protein 
3Avi_9808 (traA)7399..10161 [+], 2763222102337Ti-type conjugative transfer relaxase TraA 
4Avi_9810 (avhD4)10420..12519 [-], 2100222102338conjugative coupling protein  VirD4
5Avi_9811 (avhB11)12516..13538 [-], 1023222102339type IV secretion protein AvhB11  VirB11
6Avi_9812 (avhB10)13519..14727 [-], 1209222102340type IV secretion protein AvhB10  VirB10
7Avi_9813 (avhB9)14727..15536 [-], 810222102341type IV secretion protein AvhB9  VirB9
8Avi_9815 (avhB8)15533..16225 [-], 693222102342Type IV secretory pathway component VirB8  VirB8
9Avi_9816 (avhB6)16261..17289 [-], 1029222102343type IV secretion protein AvhB6  VirB6
10Avi_981717302..17529 [-], 228222102344hypothetical protein 
11Avi_981817522..18220 [-], 699222102345hypothetical protein  VirB5
12Avi_9819 (avhB1b)18233..19321 [-], 1089222102346type IV system transglycosylase  VirB1
13Avi_9821 (avhB4)19318..21777 [-], 2460222102347type IV secretion protein AvhB4  VirB4
14Avi_9822 (avhB2)22081..22431 [-], 351222102348type IV secrection system pilin protein  VirB2
15Avi_9824 (avhB1a)22444..23412 [-], 969222102349type IV system transglycosylase  VirB1
16Avi_982523570..24178 [+], 609222102350hypothetical protein 
17Avi_982624175..24714 [+], 540222102351hypothetical protein 
18Avi_982724711..25415 [+], 705222102352Micrococcal nuclease (thermonuclease) 
19Avi_982925416..25796 [+], 381222102353hypothetical protein 
20Avi_983025801..26397 [+], 597222102354hypothetical protein 
21Avi_983126408..26833 [+], 426222102355hypothetical protein 
22Avi_983226850..27182 [-], 333222102356hypothetical protein 
23Avi_983327576..28208 [+], 633222102357Resolvase Protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Identified as part of this study from NC_011986