SecReT4
T4SS ID792
StrainAcidithiobacillus ferrooxidans ATCC 23270
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_011761
Location1406427..1415211; 1466762..1474577
NameTrb
FunctionNA
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111001
ComponentTrbKTrbLTrbNTraFTraG
Number01101

The information of T4SS components from NC_011761
Region 1: 1406427..1415211
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AFE_16221401941..1402057 [+], 117218668053hypothetical protein 
2AFE_16231402091..1402267 [+], 177218667330hypothetical protein 
3AFE_16241402741..1402920 [+], 180218667813hypothetical protein 
4AFE_16251403110..1403754 [+], 645218665281hypothetical protein 
5AFE_16261404035..1404139 [+], 105218667380hypothetical protein 
6AFE_16271404171..1404365 [-], 195218665462hypothetical protein 
7AFE_16281404393..1404533 [+], 141218666281hypothetical protein 
8AFE_16291404550..1404741 [+], 192218666807hypothetical protein 
9AFE_16311405113..1405412 [+], 300218665941hypothetical protein 
10AFE_16331405521..1405826 [+], 306218666838hypothetical protein 
11AFE_16321405747..1406259 [-], 513218667452hypothetical protein 
12AFE_1634 (trbB)1406427..1407395 [+], 969218668066P-type conjugative transfer protein TrbB  TrbB
13AFE_16351407792..1408583 [-], 792218666794hypothetical protein 
14AFE_16361408788..1409174 [+], 387218667853hypothetical protein  TrbC
15AFE_16371409178..1409555 [+], 378218665190conjugal transfer protein TrbD  TrbD
16AFE_16381409555..1412077 [+], 2523218666854conjugal transfer protein trbE  TrbE
17AFE_16391412074..1412337 [+], 264218666369hypothetical protein 
18AFE_16401412420..1413160 [+], 741218668165conjugal transfer protein trbJ  TrbJ
19AFE_16411413172..1413426 [+], 255218665958lipoprotein 
20AFE_16421413442..1415211 [+], 1770218667889conjugal transfer protein trbL  TrbL
21AFE_16431415204..1415677 [+], 474218667574hypothetical protein 
22AFE_16441415851..1416318 [-], 468218666507hypothetical protein 
23AFE_16451416346..1416552 [-], 207218665940hypothetical protein 
24AFE_16461416685..1418169 [-], 1485218667609serine protease, DO/DeqQ family 
25AFE_16471418220..1418483 [-], 264218665242hypothetical protein 
26AFE_16481418670..1419116 [-], 447218667995heat shock protein, Hsp20 family 
27AFE_16501419340..1419477 [+], 138218667349hypothetical protein 
28AFE_16491419451..1420206 [-], 756218668041hypothetical protein 
 
Region 2: 1466762..1474577
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AFE_1690 (cbbS-2)1462235..1462567 [-], 333218665037ribulose bisphosphate carboxylase, small subunit 
2AFE_1691 (rbcL)1462659..1464080 [-], 1422218666828ribulose bisophosphate carboxylase 
3AFE_1692 (cbbR)1464153..1465151 [+], 999218665925rubisco operon transcriptional regulator 
4AFE_16931465595..1466452 [+], 858218666360hypothetical protein 
5AFE_16941466762..1467430 [+], 669218665075conjugal transfer protein  TrbF
6AFE_16951467443..1468588 [+], 1146218666648conjugal transfer protein  TrbG
7AFE_16961468590..1469591 [+], 1002218667724conjugal transfer protein 
8AFE_16981471391..1472062 [+], 672218667588conjugal transfer -like protein  TrbN
9AFE_16991472073..1474577 [+], 2505218665095TraG/TraD family protein  TraG
10AFE_17001474687..1474881 [+], 195218667519hypothetical protein 
11AFE_17021475207..1475395 [-], 189218666747hypothetical protein 
12AFE_17031475398..1475625 [-], 228218666052hypothetical protein 
13AFE_17041475603..1475839 [-], 237218665339hypothetical protein 
14AFE_17051475927..1476058 [+], 132218666563hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Valdes J; Pedroso I; Quatrini R; Dodson RJ; Tettelin H; Blake R 2nd; Eisen JA; Holmes DS (2008). Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genomics. 0.789583333. [PudMed:19077236]