SecReT4
T4SS ID803
StrainPersephonella marina EX-H1
Repliconplasmid unnamed [Browse all T4SS(s) in this replicon]
AccessionNC_012439
Location972..36140
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011111110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number010101110
ComponentTraY_FTrbC_FOrf169_F
Number010

The information of T4SS components from NC_012439
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1PERMA_A0001113..892 [+], 780225685374hypothetical protein 
2PERMA_A0002972..2924 [+], 1953225685384hypothetical protein  TraD_F
3PERMA_A00032911..3087 [+], 177225685372hypothetical protein 
4PERMA_A00053084..3803 [+], 720225685376hypothetical protein 
5PERMA_A00043787..4362 [-], 576225685377hypothetical protein 
6PERMA_A00064349..4894 [-], 546225685404hypothetical protein 
7PERMA_A00074940..5056 [-], 117225685368hypothetical protein 
8PERMA_A00085151..5720 [-], 570225685342hypothetical protein 
9PERMA_A00095879..6067 [-], 189225685351hypothetical protein 
10PERMA_A00106064..6372 [-], 309225685360hypothetical protein 
11PERMA_A00116369..7094 [-], 726225685357DNA replication protein DnaC 
12PERMA_A00127112..8011 [-], 900225685340putative integrase/recombinase 
13PERMA_A00138008..8484 [-], 477225685350hypothetical protein 
14PERMA_A00148497..9612 [-], 1116225685341hypothetical protein 
15PERMA_A00159609..9824 [-], 216225685406hypothetical protein 
16PERMA_A00169817..10356 [-], 540225685345hypothetical protein 
17PERMA_A001710457..10873 [-], 417225685346hypothetical protein 
18PERMA_A001810885..11199 [-], 315225685352putative IQ calmodulin-binding motif family protein 
19PERMA_A001911386..13944 [-], 2559225685356hypothetical protein  TraN_F
20PERMA_A002013923..14813 [-], 891225685349putative lipoprotein 
21PERMA_A002114776..15339 [-], 564225685358hypothetical protein 
22PERMA_A002215327..16043 [-], 717225685390hypothetical protein  TrbC_F
23PERMA_A002316016..16990 [-], 975225685401putative TraU  TraU_F
24PERMA_A002416974..17585 [-], 612225685344hypothetical protein  TraW_F
25PERMA_A002517722..17928 [+], 207225685402DNA-damage-inducible protein J 
26PERMA_A002617925..18545 [+], 621225685391putative lipoprotein 
27PERMA_A002718551..19297 [+], 747225685363hypothetical protein 
28PERMA_A002819300..19581 [-], 282225685353hypothetical protein 
29PERMA_A002919578..19877 [-], 300225685362hypothetical protein 
30PERMA_A003019879..20268 [-], 390225685343hypothetical protein 
31PERMA_A003120265..23756 [-], 3492225685392hypothetical protein  TraG_F
32PERMA_A003223761..25164 [-], 1404225685378hypothetical protein  TraH_F
33PERMA_A003325166..26053 [-], 888225685395hypothetical protein  TraF_F
34PERMA_A003426100..26471 [-], 372225685399hypothetical protein 
35PERMA_A003526443..27828 [-], 1386225685396hypothetical protein 
36PERMA_A003627803..28165 [-], 363225685381hypothetical protein 
37PERMA_A0037 (traC)28176..30956 [-], 2781225685407type-IV secretion system protein TraC  TraC_F
38PERMA_A0038 (traV)30946..31461 [-], 516225685386type IV conjugative transfer system protein TraV  TraV_F
39PERMA_A003931458..32126 [-], 669225685405thiol:disulfide interchange protein 
40PERMA_A004032116..32490 [-], 375225685347hypothetical protein 
41PERMA_A004132502..32894 [-], 393225685389putative lipoprotein 
42PERMA_A004232848..34098 [-], 1251225685355TraB pilus assembly family protein  TraB_F
43PERMA_A004334079..34552 [-], 474225685370bacteriolytic enzyme 
44PERMA_A004434549..35307 [-], 759225685367hypothetical protein 
45PERMA_A0045 (traE)35294..35821 [-], 528225685380type IV conjugative transfer system protein TraE  TraE_F
46PERMA_A0046 (traL)35844..36140 [-], 297225685369type IV conjugative transfer system protein TraL  TraL_F
47PERMA_A004736165..36566 [-], 402225685398hypothetical protein 
48PERMA_A004836738..37430 [+], 693225685339hypothetical protein 
49PERMA_A004937513..38217 [-], 705225685393hypothetical protein 
50PERMA_A005038374..38772 [-], 399225685379hypothetical protein 
51PERMA_A005138777..39106 [-], 330225685382hypothetical protein 
52PERMA_A005239148..39993 [-], 846225685387antirestriction protein 
53PERMA_A005340084..40929 [-], 846225685338hypothetical protein 
54PERMA_A005440948..41088 [-], 141225685373hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_012439