SecReT4
T4SS ID808
StrainSphingobium japonicum UT26S
Repliconplasmid pCHQ1 [Browse all T4SS(s) in this replicon]
AccessionNC_014007
Location79698..100474
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number011011110
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number110101110
ComponentTraY_FTrbC_FOrf169_F
Number000

The information of T4SS components from NC_014007
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1SJA_P1-0095075012..75665 [-], 654294023751hypothetical protein 
2SJA_P1-0096075728..75868 [-], 141294023752hypothetical protein 
3SJA_P1-0097076044..76661 [-], 618294023753GntR family transcriptional regulator 
4SJA_P1-0098076671..77087 [-], 417294023754XRE family transcriptional regulator 
5SJA_P1-0099077248..77670 [-], 423294023755hypothetical protein 
6SJA_P1-0100078012..78287 [+], 276294023756hypothetical protein 
7SJA_P1-0101078284..79072 [+], 789294023757putative protein-disulfide isomerase 
8SJA_P1-0102079267..79581 [+], 315294023758hypothetical protein 
9SJA_P1-0103079698..79964 [+], 267294023759hypothetical protein  TraL_F
10SJA_P1-0104079973..80608 [+], 636294023760putative sex pilus assembly and synthesis protein  TraE_F
11SJA_P1-0105080595..81383 [+], 789294023761hypothetical protein  TraK_F
12SJA_P1-01060 (traB)81380..82708 [+], 1329294023762conjugal transfer protein TraB  TraB_F
13SJA_P1-0107082708..83343 [+], 636294023763hypothetical protein  TraV_F
14SJA_P1-01080 (traC)83340..85859 [+], 2520294023764type IV secretory pathway VirB4 component  TraC_F
15SJA_P1-0109085865..86191 [+], 327294023765hypothetical protein 
16SJA_P1-0110086188..86430 [+], 243294023766hypothetical protein 
17SJA_P1-01110 (traW)86420..87079 [+], 660294023767plasmid transfer protein TraW  TraW_F
18SJA_P1-01120 (traU)87076..88089 [+], 1014294023768conjugal DNA transfer protein TraU  TraU_F
19SJA_P1-0113088188..88430 [+], 243294023769hypothetical protein 
20SJA_P1-0114088427..90349 [+], 1923294023770hypothetical protein 
21SJA_P1-01150 (traN)90346..91443 [+], 1098294023771mating pair stabilization protein TraN  TraN_F
22SJA_P1-0116091499..92299 [+], 801294023772hypothetical protein 
23SJA_P1-0117092271..92867 [+], 597294023773type IV secretory pathway protease TraF-like protein 
24SJA_P1-0118092864..93763 [+], 900294023774thioredoxin-related protein  TraF_F
25SJA_P1-0119093802..94200 [-], 399294023775PilT-like protein 
26SJA_P1-0120094197..94445 [-], 249294023776putative transcriptional regulator AbrB 
27SJA_P1-0121094668..95267 [+], 600294023777hypothetical protein 
28SJA_P1-01220 (traH)95362..96741 [+], 1380294023778sex pilus assembly protein TraH  TraH_F
29SJA_P1-01230 (traG)96746..100474 [+], 3729294023779DNA transfer and F pilus assembly protein TraG  TraG_F
30SJA_P1-01240100471..100938 [-], 468294023780hypothetical protein 
31SJA_P1-01250101219..101524 [+], 306294023781hypothetical protein 
32SJA_P1-01260101527..102138 [+], 612294023782MobA-related protein 
33SJA_P1-01270102180..102389 [-], 210294023783hypothetical protein 
34SJA_P1-01280102413..102685 [-], 273294023784hypothetical protein 
35SJA_P1-01290102729..103079 [+], 351294023785GST-like protein 
36SJA_P1-01300103133..103531 [-], 399294023786HPP-family protein 
37SJA_P1-01310103686..105029 [-], 1344294023787putative glutathione reductase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_014007