SecReT4
T4SS ID93
StrainEscherichia coli 53638 plasmid p53638_75 (NC_010720)
Repliconplasmid p53638_75 [Browse all T4SS(s) in this replicon]
AccessionNC_010720
Location121..9116; 51620..73679
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_010720
Region 1: 121..9116
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ec53638_A0013 (traD)121..2364 [+], 2244188574223conjugal transfer protein TraD  TraD_F
2Ec53638_A00142373..2771 [-], 399188574266plasmid maintenance protein 
3Ec53638_A00152771..2998 [-], 228188574254putative virulence-associated protein 
4Ec53638_A0016 (traI)3080..8350 [+], 5271188574226conjugal transfer nickase/helicase TraI  TraI_F
5Ec53638_A0017 (traX)8370..9116 [+], 747188574240conjugal transfer pilus acetylation protein TraX  TraX_F
6Ec53638_A0018 (finO)9171..9731 [+], 561188574211conjugal transfer fertility inhibition protein FinO 
7Ec53638_A00199866..10078 [+], 213188574201hypothetical protein 
8Ec53638_A002010263..10784 [+], 522188574209nuclease homolog 
9Ec53638_A002110830..10949 [+], 120188574203hypothetical protein 
10Ec53638_A0023 (insA9)11285..11680 [+], 396188574178transposase InsA9 for IS1, orfB9 
11Ec53638_A002412087..12236 [+], 150188574245hypothetical protein 
12Ec53638_A002512520..12774 [+], 255188574208replication protein 
13Ec53638_A0026 (repA1)13067..13936 [+], 870188574214replication protein 
 
Region 2: 51620..73679
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ec53638_A0076 (psiB)47111..47545 [+], 435188574180plasmid SOS inhibition protein B 
2Ec53638_A0077 (psiA)47542..48261 [+], 720188574207plasmid SOS inhibition protein A 
3Ec53638_A007848261..48779 [+], 519188574192hypothetical protein 
4Ec53638_A0079 (hok)48955..49116 [+], 162188574217stable plasmid inheritance protein Hok 
5Ec53638_A008049209..49373 [+], 165188574244hypothetical protein 
6Ec53638_A008350097..50384 [+], 288188574204hypothetical protein 
7Ec53638_A008450419..51324 [+], 906188574224hypothetical protein 
8Ec53638_A008551460..51594 [+], 135188574187putative ORF 
9Ec53638_A008651620..52210 [-], 591188574239lytic transglycosylase  Orf169_F
10Ec53638_A0087 (traM)52506..52928 [+], 423188574264conjugal transfer protein TraM  TraM_F
11Ec53638_A008853122..53793 [+], 672188574230conjugal transfer transcriptional regulator TraJ 
12Ec53638_A008953930..54157 [+], 228188574233conjugal transfer protein TraY  TraY_F
13Ec53638_A0090 (traA)54190..54555 [+], 366188574237conjugal transfer pilin subunit TraA  TraA_F
14Ec53638_A0091 (traL)54570..54881 [+], 312188574248conjugal transfer pilus assembly protein TraL  TraL_F
15Ec53638_A0092 (traE)54903..55469 [+], 567188574232conjugal transfer pilus assembly protein TraE  TraE_F
16Ec53638_A0093 (traK)55456..56184 [+], 729188574259conjugal transfer protein TraK  TraK_F
17Ec53638_A0094 (traB)56184..57611 [+], 1428188574253conjugal transfer pilus assembly protein TraB  TraB_F
18Ec53638_A0095 (traP)57601..58191 [+], 591188574216conjugal transfer protein TraP 
19Ec53638_A009658178..58402 [+], 225188574196conjugal transfer protein TrbD 
20Ec53638_A0097 (traV)58399..58914 [+], 516188574249conjugal transfer protein TraV  TraV_F
21Ec53638_A009859049..59309 [+], 261188574265conjugal transfer protein TraR 
22Ec53638_A0099 (traC)59435..62065 [+], 2631188574188conjugal transfer ATP-binding protein TraC  TraC_F
23Ec53638_A0100 (trbI)62143..62448 [+], 306188574234conjugal transfer protein TrbI 
24Ec53638_A0101 (traW)62445..63077 [+], 633188574220conjugal transfer pilus assembly protein TraW  TraW_F
25Ec53638_A0102 (traU)63074..64066 [+], 993188574177conjugal transfer pilus assembly protein TraU  TraU_F
26Ec53638_A010364096..64401 [+], 306188574212hypothetical protein 
27Ec53638_A0104 (trbC)64398..65048 [+], 651188574242conjugal transfer pilus assembly protein TrbC  TrbC_F
28Ec53638_A0105 (traN)65045..66853 [+], 1809188574189conjugal transfer mating pair stabilization protein TraN  TraN_F
29Ec53638_A0106 (trbE)66880..67137 [+], 258188574269conjugal transfer protein TrbE 
30Ec53638_A0107 (traF)67130..67873 [+], 744188574191conjugal pilus assembly protein TraF  TraF_F
31Ec53638_A0108 (trbA)67889..68236 [+], 348188574246conjugal transfer protein TrbA 
32Ec53638_A0109 (traQ)68355..68639 [+], 285188574247conjugal transfer pilin chaperone TraQ  TraQ_F
33Ec53638_A0110 (trbB)68626..69171 [+], 546188574228conjugal transfer protein TrbB 
34Ec53638_A0111 (trbJ)69161..69463 [+], 303188574225conjugal transfer protein TrbJ 
35Ec53638_A011269460..70836 [+], 1377188574243conjugal transfer pilus assembly protein TraH  TraH_F
36Ec53638_A001070833..73679 [+], 2847188574227conjugal transfer mating pair stabilization protein TraG  TraG_F
37Ec53638_A001173676..74185 [+], 510188574229conjugal transfer entry exclusion protein TraS 
38Ec53638_A001274199..74984 [+], 786188574215hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010720