SecReT4
T4SS ID94
StrainEscherichia coli 53638 plasmid p53638_226 (NC_010719)
Repliconplasmid p53638_226 [Browse all T4SS(s) in this replicon]
AccessionNC_010719
Location69337..102753
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_010719
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1Ec53638_A041264399..64524 [-], 126188574037hypothetical protein 
2Ec53638_A0413 (repA1)64587..65444 [-], 858188573941replication protein 
3Ec53638_A041565745..66002 [-], 258188574135replication protein 
4Ec53638_A041666242..66493 [-], 252188573914YihA 
5Ec53638_A041766474..66590 [-], 117188573965hypothetical protein 
6Ec53638_A041866608..67054 [+], 447188574030DNA-invertase 
7Ec53638_A041967062..67376 [-], 315188574060w0003-like protein 
8Ec53638_A042067415..67624 [-], 210188574130hypothetical protein 
9Ec53638_A042167670..68191 [-], 522188574147staphylococcal nuclease homolog 
10Ec53638_A042268375..68587 [-], 213188574076hypothetical protein 
11Ec53638_A0423 (finO)68722..69282 [-], 561188574053conjugal transfer fertility inhibition protein FinO 
12Ec53638_A0424 (traX)69337..70083 [-], 747188573950conjugal transfer pilus acetylation protein TraX  TraX_F
13Ec53638_A0425 (traI)70103..75373 [-], 5271188574158conjugal transfer nickase/helicase TraI  TraI_F
14Ec53638_A042675370..75660 [-], 291188574085TrbH 
15Ec53638_A042775682..76080 [+], 399188574008plasmid maintenance protein 
16Ec53638_A0428 (traD)76089..78341 [-], 2253188574067conjugal transfer protein TraD  TraD_F
17Ec53638_A042978467..78619 [+], 153188574156hypothetical protein 
18Ec53638_A043078623..79234 [-], 612188574140hypothetical protein 
19Ec53638_A043179306..80037 [-], 732188574016conjugal transfer surface exclusion protein TraT 
20Ec53638_A043280051..80560 [-], 510188574044conjugal transfer entry exclusion protein TraS 
21Ec53638_A043380557..83403 [-], 2847188573993conjugal transfer mating pair stabilization protein TraG  TraG_F
22Ec53638_A043483400..84776 [-], 1377188573908conjugal transfer pilus assembly protein TraH  TraH_F
23Ec53638_A0435 (trbJ)84773..85075 [-], 303188573977conjugal transfer protein TrbJ 
24Ec53638_A0436 (trbB)85065..85610 [-], 546188574021conjugal transfer protein TrbB 
25Ec53638_A0437 (traQ)85597..85881 [-], 285188574075conjugal transfer pilin chaperone TraQ  TraQ_F
26Ec53638_A0438 (trbA)86000..86347 [-], 348188574110conjugal transfer protein TrbA 
27Ec53638_A0439 (traF)86363..87100 [-], 738188573904conjugal pilus assembly protein TraF  TraF_F
28Ec53638_A0440 (trbE)87093..87353 [-], 261188574119conjugal transfer protein TrbE 
29Ec53638_A0441 (traN)87377..89185 [-], 1809188574015conjugal transfer mating pair stabilization protein TraN  TraN_F
30Ec53638_A044289182..89820 [-], 639188574138conjugal transfer pilus assembly protein TrbC  TrbC_F
31Ec53638_A044389829..90821 [-], 993188573927conjugal transfer pilus assembly protein TraU  TraU_F
32Ec53638_A0444 (traW)90818..91450 [-], 633188574172conjugal transfer pilus assembly protein TraW  TraW_F
33Ec53638_A0114 (trbI)91447..91833 [-], 387188574121conjugal transfer protein TrbI 
34Ec53638_A0115 (traC)91830..94457 [-], 2628188574101conjugal transfer ATP-binding protein TraC  TraC_F
35Ec53638_A011694450..94581 [-], 132188574013hypothetical protein 
36Ec53638_A0118 (traR)94624..94845 [-], 222188573903conjugal transfer protein TraR 
37Ec53638_A011794796..94960 [+], 165188574031hypothetical protein 
38Ec53638_A0119 (traV)94980..95495 [-], 516188573996conjugal transfer protein TraV  TraV_F
39Ec53638_A012295738..96058 [-], 321188573962conjugal transfer protein TrbD 
40Ec53638_A0123 (traP)96045..96629 [-], 585188573921conjugal transfer protein TraP 
41Ec53638_A0124 (traB)96619..98046 [-], 1428188574142conjugal transfer pilus assembly protein TraB  TraB_F
42Ec53638_A0125 (traK)98046..98774 [-], 729188574070conjugal transfer protein TraK  TraK_F
43Ec53638_A0126 (traE)98761..99327 [-], 567188573998conjugal transfer pilus assembly protein TraE  TraE_F
44Ec53638_A0127 (traL)99349..99660 [-], 312188573968conjugal transfer pilus assembly protein TraL  TraL_F
45Ec53638_A0128 (traA)99675..100040 [-], 366188574064conjugal transfer pilin subunit TraA  TraA_F
46Ec53638_A0129100073..100432 [-], 360188573978conjugal transfer protein TraY  TraY_F
47Ec53638_A0130100567..101256 [-], 690188574114conjugal transfer transcriptional regulator TraJ 
48Ec53638_A0131101360..101491 [+], 132188574027hypothetical protein 
49Ec53638_A0132 (traM)101447..101830 [-], 384188574109conjugal transfer protein TraM  TraM_F
50Ec53638_A0133102154..102753 [+], 600188573956lytic transglycosylase  Orf169_F
51Ec53638_A0134102779..102913 [-], 135188574174putative ORF 
52Ec53638_A0135103049..103870 [-], 822188573991hypothetical protein 
53Ec53638_A0136103989..104276 [-], 288188573901hypothetical protein 
54Ec53638_A0137104301..104459 [-], 159188574105hypothetical protein 
55Ec53638_A0138105322..105936 [+], 615188574045group II intron-associated open reading frame 
56Ec53638_A0139106005..106646 [+], 642188574084transposase 3 
57Ec53638_A0140106646..106993 [+], 348188573923transposase 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_010719