SecReT4
T4SS ID95
StrainEscherichia coli 1520 plasmid pIP1206 (NC_010558)
Repliconplasmid pIP1206 [Browse all T4SS(s) in this replicon]
AccessionNC_010558
Location37256..69612
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_010558
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1IPF_33634676..34834 [+], 159187736776small toxic polypeptide 
2IPF_334 (YubN)35072..35389 [-], 318187736777YubN 
3IPF_331 (YubO)35733..36020 [+], 288187736778YubO 
4IPF_329 (YubP)36139..36960 [+], 822187736779YubP 
5IPF_32837256..37846 [-], 591187736780lytic transglycosylase  Orf169_F
6IPF_327 (TraM)38198..38581 [+], 384187736781conjugal transfer protein TraM  TraM_F
7IPF_326 (TraJ)38772..39419 [+], 648187736782conjugal transfer transcriptional regulator TraJ 
8IPF_396 (TraY)39555..39770 [+], 216187736783conjugal transfer protein TraY  TraY_F
9IPF_325 (TraA)39813..40178 [+], 366187736784conjugal transfer pilin subunit TraA  TraA_F
10IPF_323 (TraL)40193..40504 [+], 312187736785conjugal transfer pilus assembly protein TraL  TraL_F
11IPF_322 (TraE)40526..41092 [+], 567187736786conjugal transfer pilus assembly protein TraE  TraE_F
12IPF_321 (TraK)41079..41807 [+], 729187736787conjugal transfer protein TraK  TraK_F
13IPF_318 (TraB)41807..43234 [+], 1428187736788conjugal transfer pilus assembly protein TraB  TraB_F
14IPF_315 (TraP)43224..43814 [+], 591187736789conjugal transfer protein TraP 
15IPF_314 (TrbG)44114..44365 [+], 252187736790conjugal transfer protein TrbG 
16IPF_312 (TraV)44362..44877 [+], 516187736791conjugal transfer protein TraV  TraV_F
17IPF_309 (TraC)45393..48020 [+], 2628187736792conjugal transfer ATP-binding protein TraC  TraC_F
18IPF_306a (TrbI)48017..48403 [+], 387187736793conjugal transfer protein TrbI 
19IPF_304 (TraW)48286..49032 [+], 747187736794conjugal transfer pilus assembly protein TraW  TraW_F
20IPF_303 (TraU)49029..50021 [+], 993187736795conjugal transfer pilus assembly protein TraU  TraU_F
21IPF_301 (TrbC)50027..50668 [+], 642187736796conjugal transfer pilus assembly protein TrbC  TrbC_F
22IPF_299 (TraN)50665..52473 [+], 1809187736797conjugal transfer mating pair stabilization protein TraN  TraN_F
23IPF_397 (TrbE)52497..52757 [+], 261187736798conjugal transfer protein TrbE 
24IPF_297 (TraF)52720..53493 [+], 774187736799conjugal pilus assembly protein TraF  TraF_F
25IPF_295 (TrbA)53507..53848 [+], 342187736800conjugal transfer protein TrbA 
26IPF_294 (ArtA)53829..54164 [-], 336187736801ArtA 
27IPF_293 (TraQ)54245..54529 [+], 285187736802conjugal transfer pilin chaperone TraQ  TraQ_F
28IPF_291 (TrbB)54516..55070 [+], 555187736803conjugal transfer protein TrbB 
29IPF_405 (TrbJ)55000..55284 [+], 285187736804conjugal transfer protein TrbJ 
30IPF_290 (TrbF)55327..55719 [+], 393187736805conjugal transfer protein TrbF 
31IPF_289 (TraH)55703..57079 [+], 1377187736806conjugal transfer pilus assembly protein TraH  TraH_F
32IPF_286 (TraG)57076..59901 [+], 2826187736807conjugal transfer mating pair stabilization protein TraG  TraG_F
33IPF_284 (TraS)59898..60353 [+], 456187736808conjugal transfer entry exclusion protein TraS 
34IPF_283 (TraT)60422..61153 [+], 732187736809conjugal transfer surface exclusion protein TraT 
35IPF_282 (TraD)61405..63576 [+], 2172187736810conjugal transfer protein TraD  TraD_F
36IPF_279a (TraI)63576..68846 [+], 5271187736811conjugal transfer nickase/helicase TraI  TraI_F
37IPF_270a (TraX)68809..69612 [+], 804187736812conjugal transfer pilus acetylation protein TraX  TraX_F
38IPF_268 (FinO)69667..70227 [+], 561187736813conjugal transfer fertility inhibition protein FinO 
39IPF_267 (YigA)70360..70572 [+], 213187736814YigA 
40IPF_265 (IS1-insB)70873..71259 [-], 387187736815IS1-insB 
41IPF_264 (IS1-insA)71300..71575 [-], 276187736816IS1-insA 
42IPF_386 (SrnB)71940..72251 [+], 312187736817SrnB 
43IPF_384 (RepA2)72535..72792 [+], 258187736818replication protein 
44IPF_387 (RepA6)73028..73102 [+], 75187736819leader peptide RepL 
45IPF_260a (RepA1)73095..73547 [+], 453187736820RepA1 
46IPF_25873596..74051 [+], 456187736821hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Perichon B; Bogaerts P; Lambert T; Frangeul L; Courvalin P; Galimand M (2008). Sequence of conjugative plasmid pIP1206 mediating resistance to aminoglycosides by 16S rRNA methylation and to hydrophilic fluoroquinolones by efflux. Antimicrob Agents Chemother. 52(7):2581-92. [PudMed:18458128]