SecReT4
T4SS ID96
StrainEscherichia coli SMS-3-5
Repliconplasmid pSMS35_130 [Browse all T4SS(s) in this replicon]
AccessionNC_010488
Location5088..37805
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_010488
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1EcSMS35_A0001154..540 [-], 387170650844replication initiation protein repA4 
2EcSMS35_A0002 (repA1)904..1773 [-], 870170650780replication protein 
3EcSMS35_A0003 (repA2)2054..2314 [-], 261170650796replication protein 
4EcSMS35_A00053164..3373 [-], 210170650792hypothetical protein 
5EcSMS35_A00063419..3880 [-], 462170650855nuclease homolog 
6EcSMS35_A00074123..4335 [-], 213170650817hypothetical protein 
7EcSMS35_A0008 (finO)4473..5084 [-], 612170650904conjugal transfer fertility inhibition protein FinO 
8EcSMS35_A0009 (traX)5088..5834 [-], 747170650820conjugal transfer pilus acetylation protein TraX  TraX_F
9EcSMS35_A0010 (traI)5854..11124 [-], 5271170650784conjugal transfer nickase/helicase TraI  TraI_F
10EcSMS35_A0011 (traD)11124..13295 [-], 2172170650889conjugal transfer protein TraD  TraD_F
11EcSMS35_A0012 (traT)13548..14279 [-], 732170650825conjugal transfer surface exclusion protein TraT 
12EcSMS35_A001314311..14808 [-], 498170650886putative type IV secretion-like conjugative transfer system protein TraS 
13EcSMS35_A0014 (traG)14829..17651 [-], 2823170650902conjugal transfer mating pair stabilization protein TraG  TraG_F
14EcSMS35_A0015 (traH)17648..19024 [-], 1377170650800conjugal transfer pilus assembly protein TraH  TraH_F
15EcSMS35_A0016 (trbJ)19021..19383 [-], 363170650880conjugal transfer protein TrbJ 
16EcSMS35_A0017 (trbB)19313..19858 [-], 546170650781conjugal transfer protein TrbB 
17EcSMS35_A0018 (traQ)19845..20129 [-], 285170650897conjugal transfer pilin chaperone TraQ  TraQ_F
18EcSMS35_A0019 (trbA)20248..20595 [-], 348170650822conjugal transfer protein TrbA 
19EcSMS35_A0020 (traF)20611..21354 [-], 744170650828conjugal pilus assembly protein TraF  TraF_F
20EcSMS35_A0021 (trbE)21347..21604 [-], 258170650840conjugal transfer protein TrbE 
21EcSMS35_A0022 (traN)21631..23439 [-], 1809170650771conjugal transfer mating pair stabilization protein TraN  TraN_F
22EcSMS35_A0023 (trbC)23436..24074 [-], 639170650809conjugal transfer pilus assembly protein TrbC  TrbC_F
23EcSMS35_A002424102..24554 [-], 453170650862hypothetical protein 
24EcSMS35_A002524584..25045 [-], 462170650772hypothetical protein 
25EcSMS35_A0026 (traU)25071..26063 [-], 993170650911conjugal transfer pilus assembly protein TraU  TraU_F
26EcSMS35_A0027 (traW)26060..26692 [-], 633170650832conjugal transfer pilus assembly protein TraW  TraW_F
27EcSMS35_A0028 (trbI)26689..27075 [-], 387170650810conjugal transfer protein TrbI 
28EcSMS35_A0029 (traC)27072..29699 [-], 2628170650779conjugal transfer ATP-binding protein TraC  TraC_F
29EcSMS35_A0030 (traR)29859..30080 [-], 222170650873conjugal transfer protein TraR 
30EcSMS35_A0031 (traV)30215..30730 [-], 516170650794conjugal transfer protein TraV  TraV_F
31EcSMS35_A003230727..30978 [-], 252170650806conjugal transfer protein TrbG 
32EcSMS35_A003330975..31292 [-], 318170650884conjugal transfer protein TrbD 
33EcSMS35_A0034 (traP)31289..31861 [-], 573170650891conjugal transfer protein TraP 
34EcSMS35_A0035 (traB)31851..33278 [-], 1428170650812conjugal transfer pilus assembly protein TraB  TraB_F
35EcSMS35_A0036 (traK)33278..34006 [-], 729170650906conjugal transfer protein TraK  TraK_F
36EcSMS35_A0037 (traE)33993..34559 [-], 567170650797conjugal transfer pilus assembly protein TraE  TraE_F
37EcSMS35_A0038 (traL)34581..34892 [-], 312170650856conjugal transfer pilus assembly protein TraL  TraL_F
38EcSMS35_A0039 (traA)34907..35266 [-], 360170650824conjugal transfer pilin subunit TraA  TraA_F
39EcSMS35_A0040 (traY)35300..35527 [-], 228170650869conjugal transfer protein TraY  TraY_F
40EcSMS35_A0041 (traJ)35621..36307 [-], 687170650783type IV secretion-like conjugative transfer system regulator TraJ 
41EcSMS35_A0042 (traM)36498..36881 [-], 384170650851conjugal transfer protein TraM  TraM_F
42EcSMS35_A004337158..37805 [+], 648170650864lytic transglycosylase  Orf169_F
43EcSMS35_A004437831..37965 [-], 135170650793hypothetical protein 
44EcSMS35_A004538102..38923 [-], 822170650799hypothetical protein 
45EcSMS35_A004639046..39333 [-], 288170650769hypothetical protein 
46EcSMS35_A004739358..39519 [-], 162170650803hypothetical protein 
47EcSMS35_A004839600..39812 [-], 213170650770hypothetical protein 
48EcSMS35_A004939805..39957 [-], 153170650839hypothetical protein 
49EcSMS35_A0050 (hok)40255..40413 [-], 159170650845small toxic polypeptide 
50EcSMS35_A005140556..40693 [-], 138170650801hypothetical protein 
51EcSMS35_A0052 (psiA)40693..41412 [-], 720170650870plasmid SOS inhibition protein A 
52EcSMS35_A0053 (psiB)41409..41843 [-], 435170650814plasmid SOS inhibition protein B 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Fricke WF; Wright MS; Lindell AH; Harkins DM; Baker-Austin C; Ravel J; Stepanauskas R (2008). Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5. J Bacteriol. 190(20):6779-94. [PudMed:18708504]