SecReT4
T4SS ID97
StrainEscherichia coli plasmid pVM01 (NC_010409)
Repliconplasmid pVM01 [Browse all T4SS(s) in this replicon]
AccessionNC_010409
Location93994..127662
NameTra_F
Functionconjugation
ClassificationType IVA; Type F
sequence This T4SS has been mentioned in a genome sequencing report.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_010409
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1pVM01_p08089017..90150 [-], 1134169546468hypothetical protein 
2pVM01_p08190256..90579 [+], 324169546507hypothetical protein 
3pVM01_p08290875..91378 [+], 504169546469hypothetical protein 
4pVM01_p08392412..92972 [-], 561169546470conjugal transfer fertility inhibition protein FinO 
5pVM01_p08493075..93935 [-], 861169546508hypothetical protein 
6pVM01_p08593994..94740 [-], 747169546471conjugal transfer pilus acetylation protein TraX  TraX_F
7pVM01_p08694760..100030 [-], 5271169546472conjugal transfer nickase/helicase TraI  TraI_F
8pVM01_p087100030..102183 [-], 2154169546473conjugal transfer protein TraD  TraD_F
9pVM01_p088102436..103167 [-], 732169546474conjugal transfer surface exclusion protein TraT 
10pVM01_p089103181..103690 [-], 510169546475conjugal transfer entry exclusion protein TraS 
11pVM01_p090103687..106512 [-], 2826169546476conjugal transfer mating pair stabilization protein TraG  TraG_F
12pVM01_p091106509..107882 [-], 1374169546477conjugal transfer pilus assembly protein TraH  TraH_F
13pVM01_p092108073..108261 [-], 189169546509hypothetical protein 
14pVM01_p093108248..108529 [-], 282169546478conjugal transfer protein TrbJ 
15pVM01_p094108519..109064 [-], 546169546479conjugal transfer protein TrbB 
16pVM01_p095109051..109332 [-], 282169546480conjugal transfer pilin chaperone TraQ  TraQ_F
17pVM01_p096109448..110191 [-], 744169546481conjugal pilus assembly protein TraF  TraF_F
18pVM01_p097110184..110441 [-], 258169546482conjugal transfer protein TrbE 
19pVM01_p098110468..112318 [-], 1851169546483conjugal transfer mating pair stabilization protein TraN  TraN_F
20pVM01_p099112315..112953 [-], 639169546484conjugal transfer pilus assembly protein TrbC  TrbC_F
21pVM01_p100112981..113433 [-], 453169546510hypothetical protein 
22pVM01_p101113463..113924 [-], 462169546511hypothetical protein 
23pVM01_p102113950..114942 [-], 993169546512conjugal transfer pilus assembly protein TraU  TraU_F
24pVM01_p103114939..115571 [-], 633169546513conjugal transfer pilus assembly protein TraW  TraW_F
25pVM01_p104115568..115954 [-], 387169546514conjugal transfer protein TrbI 
26pVM01_p105115951..118581 [-], 2631169546515conjugal transfer ATP-binding protein TraC  TraC_F
27pVM01_p106118708..119055 [-], 348169546516hypothetical protein 
28pVM01_p107119083..119301 [-], 219169546517hypothetical protein 
29pVM01_p108119381..119854 [-], 474169546518hypothetical protein 
30pVM01_p109119903..119986 [-], 84169546519hypothetical protein 
31pVM01_p110120139..120654 [-], 516169546520conjugal transfer protein TraV  TraV_F
32pVM01_p111120651..120971 [-], 321169546521conjugal transfer protein TrbD 
33pVM01_p112120958..121548 [-], 591169546522conjugal transfer protein TraP 
34pVM01_p113121538..122965 [-], 1428169546523conjugal transfer pilus assembly protein TraB  TraB_F
35pVM01_p114122965..123693 [-], 729169546524conjugal transfer protein TraK  TraK_F
36pVM01_p115123680..124246 [-], 567169546525conjugal transfer pilus assembly protein TraE  TraE_F
37pVM01_p116124268..124579 [-], 312169546526conjugal transfer pilus assembly protein TraL  TraL_F
38pVM01_p117124594..124953 [-], 360169546527conjugal transfer pilin subunit TraA  TraA_F
39pVM01_p118124986..125345 [-], 360169546528conjugal transfer protein TraY  TraY_F
40pVM01_p119125480..126169 [-], 690169546529conjugal transfer transcriptional regulator TraJ 
41pVM01_p120126356..126739 [-], 384169546530conjugal transfer protein TraM  TraM_F
42pVM01_p121127153..127662 [+], 510169546531lytic transglycosylase  Orf169_F
43pVM01_p122127959..128780 [-], 822169546532hypothetical protein 
44pVM01_p123128900..129040 [-], 141169546533hypothetical protein 
45pVM01_p124129075..129329 [-], 255169546534hypothetical protein 
46pVM01_p125130321..130458 [-], 138169546535hypothetical protein 
47pVM01_p126130458..131177 [-], 720169546536plasmid SOS inhibition protein A 
48pVM01_p127 (psiB)131174..131608 [-], 435169546537plasmid SOS inhibition protein B 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
(1) Tivendale KA; Noormohammadi AH; Allen JL; Browning GF (2009). The conserved portion of the putative virulence region contributes to virulence of avian pathogenic Escherichia coli. Microbiology. 155(Pt 2):450-60. [PudMed:19202093]