SecReT4
T4SS ID99
StrainEscherichia coli plasmid NR1 (NC_009133)
Repliconplasmid NR1 [Browse all T4SS(s) in this replicon]
AccessionNC_009133
Location49964..84510
NameTra_F
FunctionNA
ClassificationType IVA; Type F
insolico This T4SS is identified in this study.

T4SS components
ComponentTraA_FTraB_FTraC_FTraD_FTraE_FTraF_FTraG_FTraH_FTraI_F
Number111111111
ComponentTraK_FTraL_FTraM_FTraN_FTraQ_FTraU_FTraV_FTraW_FTraX_F
Number111111111
ComponentTraY_FTrbC_FOrf169_F
Number111

The information of T4SS components from NC_009133
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#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1D616_p8105845293..45868 [+], 576133756498hypothetical protein 
2D616_p81059 (psiB)45937..46347 [+], 411133756499truncated plasmid SOS inhibition protein B 
3D616_p8106046367..47086 [+], 720133756500plasmid SOS inhibition protein A 
4D616_p8106147083..47223 [+], 141133756501hypothetical protein 
5D616_p8106247308..47520 [+], 213133756502modulator of post-segregation killing protein 
6D616_p8106447366..47524 [+], 159133756503post-segregation killing protein 
7D616_p8106347762..48139 [-], 378133756504hypothetical protein 
8D616_p8106548439..48735 [+], 297133756505hypothetical protein 
9D616_p8106648846..49667 [+], 822133756506hypothetical protein 
10D616_p8106749804..49938 [+], 135133756507putative ORF 
11D616_p8106949964..50473 [-], 510133756508lytic transglycosylase  Orf169_F
12D616_p8106850889..51272 [+], 384133756509conjugal transfer protein M  TraM_F
13D616_p8107051466..52137 [+], 672133756510positive regulator of conjugal transfer operon 
14D616_p8107152274..52501 [+], 228133756511conjugal transfer protein Y  TraY_F
15D616_p8107252534..52893 [+], 360133756512prepropilin  TraA_F
16D616_p8107352908..53219 [+], 312133756513conjugal transfer protein L  TraL_F
17D616_p8107553241..53807 [+], 567133756514conjugal transfer protein E  TraE_F
18D616_p8107453794..54522 [+], 729133756515conjugal transfer protein K  TraK_F
19D616_p8107654522..55973 [+], 1452133756516conjugal transfer protein B  TraB_F
20D616_p8107855942..56529 [+], 588133756517conjugal transfer protein P 
21D616_p8107756468..56836 [+], 369133756518conjugal transfer protein 
22D616_p8107956833..57348 [+], 516133756519conjugal transfer protein  TraV_F
23D616_p8108057483..57704 [+], 222133756520conjugal transfer protein 
24D616_p8108157697..58110 [+], 414133756521hypothetical protein 
25D616_p8108258103..58576 [+], 474133756522hypothetical protein 
26D616_p8108358656..58874 [+], 219133756523hypothetical protein 
27D616_p8108458902..59249 [+], 348133756524hypothetical protein 
28D616_p8108559375..62005 [+], 2631133756525conjugal transfer protein C  TraC_F
29D616_p8108662002..62388 [+], 387133756526conjugal transfer protein 
30D616_p8108762385..63017 [+], 633133756527conjugal transfer protein  TraW_F
31D616_p8108863014..64006 [+], 993133756528conjugal transfer protein  TraU_F
32D616_p8108964030..64341 [+], 312133756529hypothetical protein 
33D616_p8109064350..64988 [+], 639133756530conjugal transfer protein  TrbC_F
34D616_p8109164985..66835 [+], 1851133756531conjugal transfer protein  TraN_F
35D616_p8109266859..67119 [+], 261133756532conjugal transfer protein 
36D616_p8109367094..67855 [+], 762133756533conjugal transfer protein  TraF_F
37D616_p8109467869..68213 [+], 345133756534conjugal transfer protein 
38D616_p8109568332..68616 [+], 285133756535pilin chaperone protein  TraQ_F
39D616_p8109668603..69148 [+], 546133756536conjugal transfer protein 
40D616_p8109769078..69425 [+], 348133756537conjugal transfer protein 
41D616_p8109869373..69798 [+], 426133756538conjugal transfer protein 
42D616_p8109969776..71158 [+], 1383133756539conjugal transfer protein  TraH_F
43D616_p8110071155..73977 [+], 2823133756540mating pair stabilization protein  TraG_F
44D616_p8110173993..74478 [+], 486133756541entry exclusion protein 
45D616_p8110274527..75258 [+], 732133756542surface exclusion lipoprotein 
46D616_p8110475416..76198 [+], 783133756543hypothetical protein 
47D616_p8110376249..78474 [+], 2226133756544coupling protein  TraD_F
48D616_p8110678474..83744 [+], 5271133756545conjugal transfer nickase/helicase  TraI_F
49D616_p8110583764..84510 [+], 747133756546pilin acetylase  TraX_F
50D616_p8110784569..85429 [+], 861133756547hypothetical protein 
51D616_p8110885532..86092 [+], 561133756548RNA-binding protein 
52D616_p8110986221..86433 [+], 213133756549hypothetical protein 
53D616_p8111086677..87138 [+], 462133756550hypothetical protein 
54D616_p8111187184..87393 [+], 210133756551modulating protein 
55D616_p8111287431..88021 [+], 591133756552hypothetical protein 
56D616_p8111388261..88515 [+], 255133756553negative regulator of repA1 expression 
57D616_p8111588753..88827 [+], 75133756554leader peptide of repA1 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes
Identified as part of this study from NC_009133