SecReT6
CDSeasy, fast gene prediction and functional annotation for bacterial genomes
The CDSeasy tool quickly performs the protein-coding gene identification with Prodigal V2.60 and the initial functional annotation using BLASTp against the Representative Proteomes RP55 Bacterial database. It accepts the complete genome sequence (in FASTA format) or the contig/scaffold sequences (in multi-FASTA format) of the partially sequenced bacterial genome with generated gzip-compressed GenBank file.

Set parameter
CDSeasy includes
In general, CDSeasy takes ~ 10 mins for the gene finding and initial functional annotation of a 5-Mb bacterial genome sequence, including 1 min for the CDS detection with Prodigal V2.60 and 7 mins for function prediction by using BLASTp against the RP55 bacterial database.

Run
Please click "Run" after the required file has been uploaded.

Retrieve Results
Input your job ID