SecReT6
Protein ID: 116050311
SecReT6 ID151
T6SS typei4a
Gene symbol-
Locus tagPA14_33990
StrainPseudomonas aeruginosa UCBPP-PA14
Repliconchromosome [GenBank: NC_008463] [Browse all T6SS(s) in this replicon]
Location [Strand]3021340..3023889 [-]
ProductClpA/B-type protease
NoteTssH
UniProt IDQ02MG4
KEGG IDpau:PA14_33990
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 1.50E-37, Aligned region: 220..296
AAA_2 [PF07724], Evalue: 1.50E-37, Aligned region: 611..775
AAA [PF00004], Evalue: 8.40E-21, Aligned region: 220..350
AAA [PF00004], Evalue: 8.40E-21, Aligned region: 464..519
AAA [PF00004], Evalue: 8.40E-21, Aligned region: 617..734
AAA_5 [PF07728], Evalue: 8.80E-15, Aligned region: 220..240
AAA_5 [PF07728], Evalue: 8.80E-15, Aligned region: 616..735
Clp_N [PF02861], Evalue: 6.40E-12, Aligned region: 21..71
Clp_N [PF02861], Evalue: 6.40E-12, Aligned region: 100..125
AAA_22 [PF13401], Evalue: 3.30E-09, Aligned region: 220..301
AAA_22 [PF13401], Evalue: 3.30E-09, Aligned region: 336..392
AAA_22 [PF13401], Evalue: 3.30E-09, Aligned region: 615..720
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 68..68
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 197..240
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 264..298
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 410..535
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 606..657
AAA_16 [PF13191], Evalue: 5.00E-08, Aligned region: 681..708
AAA_19 [PF13245], Evalue: 2.50E-06, Aligned region: 217..242
AAA_19 [PF13245], Evalue: 2.50E-06, Aligned region: 613..638
AAA_14 [PF13173], Evalue: 5.30E-06, Aligned region: 220..301
AAA_14 [PF13173], Evalue: 5.30E-06, Aligned region: 615..706
ClpB_D2-small [PF10431], Evalue: 5.90E-06, Aligned region: 781..848
Sigma54_activat [PF00158], Evalue: 1.90E-05, Aligned region: 243..262
Sigma54_activat [PF00158], Evalue: 1.90E-05, Aligned region: 615..733
Zeta_toxin [PF06414], Evalue: 2.40E-05, Aligned region: 220..240
Zeta_toxin [PF06414], Evalue: 2.40E-05, Aligned region: 610..656
AAA_17 [PF13207], Evalue: 4.90E-05, Aligned region: 220..261
AAA_17 [PF13207], Evalue: 4.90E-05, Aligned region: 513..513
AAA_17 [PF13207], Evalue: 4.90E-05, Aligned region: 620..653
IstB_IS21 [PF01695], Evalue: 0.00015, Aligned region: 214..239
IstB_IS21 [PF01695], Evalue: 0.00015, Aligned region: 616..636
AAA_18 [PF13238], Evalue: 0.00025, Aligned region: 220..240
AAA_18 [PF13238], Evalue: 0.00025, Aligned region: 620..651
FtsK_SpoIIIE [PF01580], Evalue: 0.00055, Aligned region: 201..261
FtsK_SpoIIIE [PF01580], Evalue: 0.00055, Aligned region: 438..531
NACHT [PF05729], Evalue: 0.00088, Aligned region: 220..248
NACHT [PF05729], Evalue: 0.00088, Aligned region: 617..641
AAA_28 [PF13521], Evalue: 0.0011, Aligned region: 220..266
AAA_28 [PF13521], Evalue: 0.0011, Aligned region: 430..430
AAA_28 [PF13521], Evalue: 0.0011, Aligned region: 617..636
T2SE [PF00437], Evalue: 0.0012, Aligned region: 209..236
T2SE [PF00437], Evalue: 0.0012, Aligned region: 591..685
ResIII [PF04851], Evalue: 0.0022, Aligned region: 211..241
ResIII [PF04851], Evalue: 0.0022, Aligned region: 288..301
ResIII [PF04851], Evalue: 0.0022, Aligned region: 602..638
AAA_25 [PF13481], Evalue: 0.0046, Aligned region: 220..244
AAA_25 [PF13481], Evalue: 0.0046, Aligned region: 274..317
AAA_25 [PF13481], Evalue: 0.0046, Aligned region: 434..508
AAA_25 [PF13481], Evalue: 0.0046, Aligned region: 613..641
AAA_25 [PF13481], Evalue: 0.0046, Aligned region: 787..804
RNA_helicase [PF00910], Evalue: 0.0055, Aligned region: 221..241
RNA_helicase [PF00910], Evalue: 0.0055, Aligned region: 618..638
AAA_29 [PF13555], Evalue: 0.0097, Aligned region: 210..236
AAA_29 [PF13555], Evalue: 0.0097, Aligned region: 614..641
Protein Sequence: 849 a.a.     [Download]
>gi|116050311|ref|YP_790872.1| unnamed protein product [Pseudomonas aeruginosa UCBPP-PA14]
MELAALIGRLNPDCRRALERAAQRCLQRTHHYVEIEHLLLELLDIDGGDFACLLPRFGLERDALVAEINL
SLELFKAGNTRTPALSAHTIGLLEDAVVHASVLGQAQIRSGLLLLALLDREERRALLLNSASSLLRIPHE
ALQANLLEWIQTSREQPPAPNRPAAGGDKPESAPDPLLDQYTQDLTAEARAGRIDPIVGRDGEIRQCVDI
LLRRRQNNPILVGAPGVGKTAVVEGLALRIAAGEVPPSLQEVILRVLDLGLLQAGASMKGEFEQRLKGVI
DAVRNSAQPIILFIDEAHTLIGAGGAEGGSDAANLLKPALARGELRTLAATTWLEYKKYFEKDPALTRRF
QLVQVEEPDEATAVEMLRGVAGKLEQHHGVQIMDAAIVDAVKLSHRYISGRQLPDKAISVLDTACARVAL
GQHDVPPPLESLRHREQALEEELQRLRREQATGLDHSARITALESESGDNRRTIRELETRWDEEREAVRE
LLDTRRELLALSESADAAKPDEELDGRIDHLAAELARLAAGLEAIRQDDPLVPEQVDSRTVAAVIAGWTG
IPVGKMLADEAHAIRSLAQRMGQRVMGQEAALGAIAQRIQAYRAGLSDPAKPVGVFLLPGPTGVGKTETA
YALADALYGGERNLISINLSEYQEAHTVSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPD
VLEAFYNVFDKGVMEDGTGLVVDFRNTVILATSNVGAELLLDSPAEQVATPAFDERLRKVLLQTFRPAFL
ARMTVVPYRPLEEATLEGIVVAKLEKLRERYKAATGKQFDFDPAIVKAVLAKCSAAGARDIENVLMAQVT
GKLAEWVLE
 
Nucleotide Sequence: 2550 bp     [Download]
>gi|116048575|ref|NC_008463.1|:c3023889-3021340 Pseudomonas aeruginosa UCBPP-PA14 chromosome, complete genome
ATGGAACTCGCCGCCCTGATCGGCCGCCTCAACCCGGACTGTCGCCGCGCCTTGGAGCGCGCCGCGCAAC
GCTGCCTGCAACGCACCCATCATTACGTAGAGATCGAGCACCTGCTGCTGGAGCTGCTGGACATCGACGG
CGGCGACTTCGCCTGCCTGCTGCCGCGCTTCGGCCTGGAGCGCGACGCCCTGGTCGCCGAGATCAACCTG
TCGCTGGAGCTGTTCAAGGCCGGCAATACCCGCACTCCGGCGCTGTCCGCGCACACCATCGGCCTGCTCG
AGGACGCCGTGGTCCACGCCAGCGTGCTCGGCCAGGCGCAGATCCGTTCCGGCCTGCTGCTGCTCGCCCT
GCTCGACCGCGAGGAGCGCCGCGCCCTGCTGCTGAACAGCGCGTCGTCGCTACTGCGGATTCCCCACGAG
GCCTTGCAGGCCAACCTGCTGGAGTGGATCCAGACCTCCCGCGAACAGCCGCCCGCGCCGAACCGCCCGG
CGGCAGGCGGCGACAAGCCGGAAAGCGCCCCGGACCCGCTGCTCGACCAGTACACCCAGGACCTCACCGC
CGAAGCCCGCGCCGGGCGCATCGACCCCATAGTCGGGCGCGACGGGGAGATCCGCCAGTGCGTCGACATC
CTCCTGCGCCGGCGGCAGAACAACCCGATCCTGGTCGGCGCGCCGGGCGTCGGCAAGACCGCGGTGGTCG
AGGGCCTGGCCCTGCGCATCGCCGCCGGCGAAGTGCCGCCGTCGTTGCAGGAGGTGATCCTGCGGGTGCT
CGACCTCGGCCTGTTGCAGGCCGGCGCCAGCATGAAGGGCGAGTTCGAGCAGCGCCTCAAGGGCGTGATC
GACGCCGTGCGCAACAGCGCGCAGCCGATCATCCTGTTCATCGACGAGGCGCACACGCTGATCGGCGCCG
GCGGCGCAGAAGGCGGCAGCGACGCCGCCAACCTGCTCAAGCCGGCCCTGGCGCGCGGCGAGTTGCGCAC
CCTGGCGGCCACCACCTGGCTGGAATACAAGAAATACTTCGAGAAGGACCCGGCGCTGACCCGGCGCTTC
CAACTGGTCCAGGTCGAGGAGCCGGACGAGGCCACCGCCGTGGAGATGCTGCGCGGCGTCGCCGGCAAGC
TGGAACAGCATCACGGCGTGCAGATCATGGACGCGGCCATCGTCGATGCGGTGAAGCTGTCGCACCGCTA
CATCTCCGGCCGCCAGTTGCCGGACAAGGCGATCAGCGTGCTCGACACCGCCTGCGCGCGGGTCGCCCTC
GGCCAGCACGACGTGCCGCCGCCGCTGGAAAGCCTGCGCCACCGCGAGCAGGCGCTGGAAGAGGAATTGC
AGCGGCTGCGCCGGGAACAGGCCACCGGCCTCGACCACAGCGCGCGTATCACCGCCCTGGAAAGCGAGTC
GGGCGATAACCGCCGGACCATCCGCGAGCTGGAGACCCGCTGGGACGAGGAACGCGAAGCGGTGCGCGAA
CTGCTCGACACCCGCCGCGAATTGCTGGCCCTCAGCGAAAGCGCCGACGCGGCCAAGCCCGACGAGGAAC
TGGACGGTCGCATCGACCACCTGGCCGCCGAACTGGCGCGCCTGGCGGCCGGCCTCGAAGCCATCCGCCA
GGACGACCCGCTGGTTCCCGAGCAGGTGGACTCGCGTACCGTGGCCGCGGTGATCGCCGGCTGGACCGGC
ATCCCGGTGGGCAAGATGCTCGCCGACGAAGCCCACGCCATCCGTTCCCTGGCGCAACGAATGGGCCAGC
GGGTGATGGGCCAGGAGGCCGCCCTGGGCGCCATCGCCCAGCGCATCCAGGCCTATCGCGCCGGACTCAG
CGACCCGGCCAAGCCGGTCGGCGTATTCCTCCTGCCCGGCCCCACCGGCGTGGGCAAGACCGAGACCGCC
TACGCCCTGGCCGACGCCCTCTACGGCGGCGAACGCAACCTGATCAGCATCAACCTCTCCGAGTACCAGG
AGGCCCACACCGTCAGCCAGCTCAAGGGCGCCCCGCCCGGCTACGTCGGCTACGGCAGTGGCGGCGTGCT
CACCGAAGCGGTGCGCCGCAAGCCCTATTCGGTGGTGCTGCTGGACGAGATCGAGAAAGCCCATCCGGAC
GTGCTGGAAGCCTTCTACAACGTGTTCGACAAGGGTGTGATGGAAGACGGCACCGGCCTGGTGGTGGACT
TCAGGAACACCGTGATCCTCGCCACCAGCAACGTCGGCGCCGAACTGCTGCTGGACAGCCCGGCCGAACA
GGTCGCCACCCCGGCCTTCGACGAGCGCCTGCGCAAAGTCTTGCTGCAAACCTTCCGCCCGGCGTTCCTC
GCGCGCATGACCGTGGTGCCTTACCGGCCGCTGGAGGAAGCCACCCTGGAAGGCATCGTCGTGGCCAAGC
TGGAAAAACTGCGGGAACGCTACAAGGCCGCTACCGGCAAACAGTTCGACTTCGACCCGGCCATCGTCAA
GGCCGTGCTCGCCAAGTGCAGCGCGGCGGGCGCGCGGGATATCGAGAACGTGCTGATGGCGCAGGTGACG
GGGAAGTTGGCGGAGTGGGTACTCGAATGA
 Primer design