SecReT6
Protein ID: 120556629
SecReT6 ID163
T6SS typei1
Gene symbol-
Locus tagMaqu_3724
StrainMarinobacter aquaeolei VT8
Repliconchromosome [GenBank: NC_008740] [Browse all T6SS(s) in this replicon]
Location [Strand]4133204..4135891 [-]
ProductATPase
NoteTssH
UniProt IDA1U724
KEGG IDmaq:Maqu_3724
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 1.00E-39, Aligned region: 234..312
AAA_2 [PF07724], Evalue: 1.00E-39, Aligned region: 633..794
AAA [PF00004], Evalue: 1.10E-18, Aligned region: 236..366
AAA [PF00004], Evalue: 1.10E-18, Aligned region: 639..761
AAA_5 [PF07728], Evalue: 1.90E-14, Aligned region: 236..277
AAA_5 [PF07728], Evalue: 1.90E-14, Aligned region: 638..760
ClpB_D2-small [PF10431], Evalue: 1.10E-13, Aligned region: 150..169
ClpB_D2-small [PF10431], Evalue: 1.10E-13, Aligned region: 508..535
ClpB_D2-small [PF10431], Evalue: 1.10E-13, Aligned region: 800..874
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 94..141
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 213..253
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 279..314
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 422..503
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 609..677
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 703..732
AAA_16 [PF13191], Evalue: 3.10E-13, Aligned region: 828..844
AAA_22 [PF13401], Evalue: 2.40E-08, Aligned region: 235..328
AAA_22 [PF13401], Evalue: 2.40E-08, Aligned region: 637..728
AAA_25 [PF13481], Evalue: 1.90E-05, Aligned region: 236..276
AAA_25 [PF13481], Evalue: 1.90E-05, Aligned region: 633..670
AAA_19 [PF13245], Evalue: 2.10E-05, Aligned region: 233..257
AAA_19 [PF13245], Evalue: 2.10E-05, Aligned region: 379..413
AAA_19 [PF13245], Evalue: 2.10E-05, Aligned region: 633..660
AAA_29 [PF13555], Evalue: 0.00021, Aligned region: 228..252
AAA_29 [PF13555], Evalue: 0.00021, Aligned region: 635..663
NACHT [PF05729], Evalue: 0.00038, Aligned region: 44..71
NACHT [PF05729], Evalue: 0.00038, Aligned region: 236..263
NACHT [PF05729], Evalue: 0.00038, Aligned region: 397..455
NACHT [PF05729], Evalue: 0.00038, Aligned region: 639..666
NACHT [PF05729], Evalue: 0.00038, Aligned region: 844..866
AAA_14 [PF13173], Evalue: 0.00078, Aligned region: 304..417
AAA_14 [PF13173], Evalue: 0.00078, Aligned region: 637..720
Arch_ATPase [PF01637], Evalue: 0.00099, Aligned region: 216..250
Arch_ATPase [PF01637], Evalue: 0.00099, Aligned region: 288..320
Arch_ATPase [PF01637], Evalue: 0.00099, Aligned region: 639..674
Arch_ATPase [PF01637], Evalue: 0.00099, Aligned region: 709..725
DUF258 [PF03193], Evalue: 0.001, Aligned region: 213..253
DUF258 [PF03193], Evalue: 0.001, Aligned region: 639..679
Clp_N [PF02861], Evalue: 0.002, Aligned region: 43..83
Clp_N [PF02861], Evalue: 0.002, Aligned region: 121..141
AAA_18 [PF13238], Evalue: 0.0024, Aligned region: 236..256
AAA_18 [PF13238], Evalue: 0.0024, Aligned region: 639..675
Sigma54_activat [PF00158], Evalue: 0.004, Aligned region: 234..252
Sigma54_activat [PF00158], Evalue: 0.004, Aligned region: 637..736
IstB_IS21 [PF01695], Evalue: 0.0041, Aligned region: 220..260
IstB_IS21 [PF01695], Evalue: 0.0041, Aligned region: 638..649
AAA_17 [PF13207], Evalue: 0.0058, Aligned region: 236..277
AAA_17 [PF13207], Evalue: 0.0058, Aligned region: 639..673
Protein Sequence: 895 a.a.     [Download]
>gi|120556629|ref|YP_960980.1| ATPase [Marinobacter aquaeolei VT8]
MCSAFWNNYRNKDITVIRVELPALIGRLNDISRQALEASAALCISRQGAEITPAHLLFKLLETPFSDVRQ
ILEHTGINHQQLQPVVGDSLNGEPQTAEPYPSFSPLLVELMQDAWLLASTELGHTELRSGAVFLALLMNA
DRYLMPRVAQALVDINREQLRKQFDRVTEGSVERPQLMESGGAKRAVEADMDPLKRYATDFTKLAREDKL
DPVVCRDAEIDQMIDILCRRRKNNPIVVGDAGVGKSAVVEGLALRIVNGDVPDRLKNVELWTLDMGALQA
GASVKGEFEKRLKGVIEAVKGSATPIILFIDEAHTLIGAGNSEGGSDAANLLKPALARGELRTIAATTWR
EYKKYFEKDPALSRRFQPVALDEPTPGEAVHILRGLRTVYEKAHQVLIADSALKAAAEMSARYLAGRQLP
DKAIDVLDTACARVSLNLSTPPRRLSHVRSELHQLAMEQELLSREHTLGQNVDAEREQTLEQKIADLTAE
SSTLEQSWNDQRELVARLVEIREQLLAGDVEGETADDAAVEMAESDHEERPDLKSEAAAIEQELAELQAD
EPLVHARVDARQVAEVIADWTGIPVNRMTTDELEKITHLPAYLQAHIKGQDTAIDCLHQHLLTARADLRR
PGRPMGAFLLVGPSGVGKTETVVQLAELLYGGRQFLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGILT
EAIRQKPYSVVLLDEVEKAHPEVLNLFYQAFDKGELADGEGRLIDCKNVVFFLTSNLGFQTIVNHAEEPE
KIEEALYPELANFFKPALLARMEVVPYLPLGEDTLNRIVGDKLQRLADQIQTRYHTEVELEDGLVEAIRS
RATRSENGARMLESIIEGELLPPVSLALLEKLAAREPVTKVTLGVTENKFTGTVA
 
Nucleotide Sequence: 2688 bp     [Download]
>gi|120552944|ref|NC_008740.1|:c4135891-4133204 Marinobacter aquaeolei VT8, complete genome
ATGTGCTCAGCGTTCTGGAACAACTACCGAAATAAGGACATCACTGTGATTCGGGTAGAACTGCCGGCGC
TGATCGGGCGCCTTAACGACATTTCACGCCAGGCTCTGGAGGCCTCCGCGGCCCTGTGCATCAGCCGTCA
GGGCGCCGAGATTACCCCGGCGCACCTGCTGTTCAAACTGCTGGAAACGCCGTTCTCGGATGTTCGCCAG
ATCCTCGAACACACCGGCATCAACCACCAGCAACTGCAACCCGTGGTGGGTGACAGCCTGAACGGCGAAC
CTCAGACCGCCGAACCGTATCCGTCGTTCTCGCCGCTGCTGGTAGAACTGATGCAGGACGCCTGGCTGCT
GGCCTCGACCGAACTCGGCCATACCGAACTGCGTTCCGGCGCGGTGTTCCTGGCCCTGCTGATGAACGCC
GATCGCTACCTGATGCCCCGGGTGGCGCAGGCGCTGGTGGACATCAACCGGGAACAGCTGCGCAAGCAGT
TTGATCGGGTAACCGAGGGTTCTGTGGAGCGTCCGCAGCTGATGGAAAGCGGTGGTGCCAAGCGAGCGGT
TGAAGCCGATATGGACCCACTCAAACGTTACGCCACCGACTTCACCAAGCTGGCCCGGGAAGACAAACTG
GACCCCGTGGTGTGTCGCGATGCCGAGATCGATCAGATGATCGATATCCTCTGCCGTCGCCGCAAGAACA
ACCCCATCGTGGTGGGCGACGCTGGCGTGGGCAAAAGCGCCGTGGTGGAGGGCCTGGCCCTGCGCATTGT
TAACGGCGACGTGCCGGACCGGCTGAAGAACGTCGAACTCTGGACCCTGGACATGGGTGCCCTGCAGGCC
GGTGCCTCGGTGAAGGGCGAGTTTGAAAAACGCCTGAAGGGCGTGATCGAAGCCGTGAAAGGTTCGGCGA
CCCCGATCATCCTGTTCATCGACGAAGCTCACACCCTGATCGGTGCGGGTAACAGCGAAGGTGGCTCCGA
CGCTGCCAACCTGCTGAAGCCAGCCCTGGCCCGTGGCGAACTGCGCACCATCGCTGCCACCACCTGGCGC
GAGTACAAGAAATACTTCGAAAAAGACCCGGCTCTCAGCCGCCGGTTCCAACCGGTGGCCCTGGACGAGC
CAACGCCGGGCGAAGCAGTCCACATCCTCCGTGGCCTGCGCACGGTCTACGAAAAAGCCCATCAGGTACT
GATCGCCGACAGCGCCCTTAAAGCCGCCGCAGAAATGTCCGCCCGTTACCTGGCCGGTCGCCAGCTGCCG
GACAAGGCCATCGATGTTCTCGATACCGCCTGCGCCCGGGTCAGCCTGAACCTGAGTACACCGCCACGCC
GTCTCAGCCATGTGCGCAGTGAGCTGCACCAGTTGGCCATGGAGCAGGAGCTTCTGAGCCGGGAACACAC
GCTTGGCCAGAACGTGGATGCCGAGCGCGAACAGACCCTGGAACAGAAGATTGCCGACCTGACCGCCGAA
TCCAGCACGCTGGAACAAAGCTGGAATGACCAGCGCGAACTGGTGGCCCGCCTGGTCGAGATCCGTGAAC
AGCTGTTGGCGGGGGATGTCGAGGGCGAAACCGCGGATGACGCTGCTGTTGAGATGGCCGAGAGCGATCA
CGAAGAACGCCCGGACCTGAAAAGCGAAGCCGCCGCCATCGAACAGGAACTGGCTGAACTCCAGGCCGAC
GAACCGTTGGTACACGCCCGGGTGGATGCCCGCCAGGTGGCCGAAGTCATCGCCGACTGGACCGGCATCC
CGGTCAACCGCATGACCACCGACGAGCTGGAAAAAATCACCCACCTGCCGGCGTACCTGCAGGCCCACAT
CAAAGGCCAGGACACGGCCATCGACTGCCTGCATCAGCACCTGCTCACCGCCCGCGCCGACTTGCGCCGG
CCGGGTCGCCCCATGGGCGCCTTCCTGCTGGTAGGCCCCAGTGGTGTGGGCAAAACCGAAACCGTGGTGC
AACTGGCTGAACTGCTCTACGGCGGCCGCCAGTTCCTCACCACCATCAACATGTCCGAATACCAGGAGAA
ACACACCGTCTCCCGCCTGATCGGCTCGCCCCCAGGCTACGTCGGATTCGGCGAAGGCGGCATCCTCACC
GAAGCCATCCGCCAGAAGCCTTATTCCGTGGTGCTGCTCGACGAAGTCGAAAAAGCCCACCCGGAAGTGC
TTAACCTGTTCTACCAGGCTTTCGACAAAGGCGAACTGGCCGACGGTGAAGGCCGGTTGATCGACTGCAA
GAACGTGGTCTTCTTCCTGACCTCCAACCTCGGCTTCCAGACCATCGTCAACCACGCCGAAGAGCCGGAG
AAGATCGAAGAAGCCCTGTACCCGGAACTGGCCAACTTCTTCAAGCCGGCATTGCTGGCGCGGATGGAAG
TGGTGCCCTACCTGCCGCTGGGTGAAGACACTCTCAACCGCATCGTCGGCGACAAACTCCAGCGCCTGGC
TGACCAGATTCAAACTCGTTACCACACCGAGGTGGAACTGGAAGACGGCCTGGTCGAAGCCATCCGCAGC
CGCGCTACCAGAAGTGAAAACGGCGCGCGGATGCTGGAGTCGATCATCGAAGGCGAACTGCTGCCACCGG
TGTCGCTGGCGCTGCTGGAAAAACTGGCGGCCAGGGAGCCGGTGACGAAGGTGACGCTTGGGGTTACTGA
AAACAAGTTCACGGGCACAGTCGCCTGA
 Primer design