SecReT6
Protein ID: 126450804
SecReT6 ID194
T6SS typeN/A
Gene symbol-
Locus tagBMA10247_3147
StrainBurkholderia mallei NCTC 10247
Repliconchromosome I [GenBank: NC_009080] [Browse all T6SS(s) in this replicon]
Location [Strand]3107639..3110308 [+]
ProductClpA/B type protease
NoteTssH
UniProt IDA3MQX9
KEGG IDbmn:BMA10247_3147
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 3.10E-44, Aligned region: 231..328
AAA_2 [PF07724], Evalue: 3.10E-44, Aligned region: 619..787
AAA [PF00004], Evalue: 6.50E-19, Aligned region: 232..345
AAA [PF00004], Evalue: 6.50E-19, Aligned region: 624..719
ClpB_D2-small [PF10431], Evalue: 2.80E-13, Aligned region: 794..868
AAA_5 [PF07728], Evalue: 4.70E-13, Aligned region: 232..252
AAA_5 [PF07728], Evalue: 4.70E-13, Aligned region: 306..362
AAA_5 [PF07728], Evalue: 4.70E-13, Aligned region: 623..744
Clp_N [PF02861], Evalue: 4.30E-12, Aligned region: 27..74
Clp_N [PF02861], Evalue: 4.30E-12, Aligned region: 114..131
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 56..77
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 209..256
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 276..310
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 469..496
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 614..661
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 690..712
AAA_16 [PF13191], Evalue: 3.40E-10, Aligned region: 742..869
AAA_22 [PF13401], Evalue: 9.50E-07, Aligned region: 232..318
AAA_22 [PF13401], Evalue: 9.50E-07, Aligned region: 351..392
AAA_22 [PF13401], Evalue: 9.50E-07, Aligned region: 620..644
AAA_22 [PF13401], Evalue: 9.50E-07, Aligned region: 685..717
Sigma54_activat [PF00158], Evalue: 5.50E-06, Aligned region: 214..248
Sigma54_activat [PF00158], Evalue: 5.50E-06, Aligned region: 621..741
AAA_17 [PF13207], Evalue: 9.30E-05, Aligned region: 233..302
AAA_17 [PF13207], Evalue: 9.30E-05, Aligned region: 623..659
AAA_17 [PF13207], Evalue: 9.30E-05, Aligned region: 817..835
IstB_IS21 [PF01695], Evalue: 0.00017, Aligned region: 223..253
IstB_IS21 [PF01695], Evalue: 0.00017, Aligned region: 623..641
IstB_IS21 [PF01695], Evalue: 0.00017, Aligned region: 798..834
AAA_29 [PF13555], Evalue: 0.00021, Aligned region: 224..248
AAA_29 [PF13555], Evalue: 0.00021, Aligned region: 619..648
AAA_29 [PF13555], Evalue: 0.00021, Aligned region: 719..751
Zeta_toxin [PF06414], Evalue: 0.00028, Aligned region: 128..163
Zeta_toxin [PF06414], Evalue: 0.00028, Aligned region: 231..252
Zeta_toxin [PF06414], Evalue: 0.00028, Aligned region: 613..663
AAA_19 [PF13245], Evalue: 0.00037, Aligned region: 230..258
AAA_19 [PF13245], Evalue: 0.00037, Aligned region: 620..645
NACHT [PF05729], Evalue: 0.00081, Aligned region: 232..259
NACHT [PF05729], Evalue: 0.00081, Aligned region: 375..462
NACHT [PF05729], Evalue: 0.00081, Aligned region: 624..643
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 211..246
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 284..336
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 621..662
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 694..717
AAA_25 [PF13481], Evalue: 0.0012, Aligned region: 232..255
AAA_25 [PF13481], Evalue: 0.0012, Aligned region: 288..327
AAA_25 [PF13481], Evalue: 0.0012, Aligned region: 442..493
AAA_25 [PF13481], Evalue: 0.0012, Aligned region: 525..551
AAA_25 [PF13481], Evalue: 0.0012, Aligned region: 619..643
AAA_14 [PF13173], Evalue: 0.0013, Aligned region: 233..365
AAA_14 [PF13173], Evalue: 0.0013, Aligned region: 622..704
AAA_30 [PF13604], Evalue: 0.0043, Aligned region: 17..40
AAA_30 [PF13604], Evalue: 0.0043, Aligned region: 217..309
AAA_30 [PF13604], Evalue: 0.0043, Aligned region: 466..499
AAA_30 [PF13604], Evalue: 0.0043, Aligned region: 619..652
SRP54 [PF00448], Evalue: 0.0059, Aligned region: 232..253
SRP54 [PF00448], Evalue: 0.0059, Aligned region: 438..507
SRP54 [PF00448], Evalue: 0.0059, Aligned region: 622..653
MobB [PF03205], Evalue: 0.0095, Aligned region: 233..256
MobB [PF03205], Evalue: 0.0095, Aligned region: 622..655
Protein Sequence: 889 a.a.     [Download]
>gi|126450804|ref|YP_001082665.1| ClpA/B type protease [Burkholderia mallei NCTC 10247]
MSTPLKTLIAKLNPVCRKATERAASHCFARGHYEVDLEHLFLALLDESTGDVPLVLRASGVDPHALRADL
ERELERLKTGNTRTPVFSVHLSELFEQAWLIASLDSQIGRIRSGHLLLALLTGPDLAQFAQRMSSQFARV
RVDDLKHKFDEIAAGSSEAEPRHADADVAVPDGAAASGDAPRGPSKTPALDTYTTNLTQRAREGKIDPVI
GRDAEIRQAIDILMRRRQNNPIMTGEAGVGKTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASV
KGEFENRLKSVIDEVKKSAHPIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKK
YFEKDAALARRFQVVKIEEPSEPLAAAMLRGMAALMERHFNVRVLDDAITEAVRLSHRYISGRQLPDKAI
SVLDTACAKVALAHSSTPAAIDDAKKRIERIDAEIAALEREAASGAAHDARLAELREARDADLKALAEDA
ARYEEERALVTEIGALRAELDAARESSADGKPVDVDATRAKLAERVDALRARQGNQPMVPLQVDGHVVAE
IVASWTGIPLGRMVKDEIETVLNLRDLLGARVIGQDHALGAIAQRVRTATANLEDPNKPRGVFMFVGPSG
VGKTETALALADVLYGGERKLITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDE
VEKAHPDVLEMFFQVFDKGAMDDAEGREIDFRNTLIILTSNVGSSAVMQACLNKAPQELPDAETLAETLR
PQLYKTFKPAFLGRMKVIPYYPISDDVLAEIIELKLERIRRRIEANHKAAFEWDESLVDAVLARCTEVDS
GARNVDHILNGTLLPEIAELVLSRIADGEAIVRIAARAAETGEFEYTVE
 
Nucleotide Sequence: 2670 bp     [Download]
>gi|126447966|ref|NC_009080.1|:3107639-3110308 Burkholderia mallei NCTC 10247 chromosome I, complete sequence
ATGAGCACGCCCCTGAAGACCCTGATCGCGAAACTGAACCCGGTGTGCCGCAAGGCCACCGAGCGCGCCG
CCAGCCACTGCTTCGCGCGCGGTCACTACGAAGTGGATCTCGAGCATCTGTTTCTCGCGCTGCTCGACGA
GTCGACCGGCGACGTGCCGCTCGTGCTGCGCGCGAGCGGCGTCGATCCGCACGCGCTGCGCGCGGATCTC
GAGCGCGAGCTCGAAAGACTGAAAACGGGCAACACGCGCACGCCGGTGTTTTCGGTGCATCTGAGCGAGC
TGTTCGAGCAGGCGTGGCTCATCGCGTCGCTCGATTCGCAGATCGGACGGATCCGCTCGGGGCACCTGCT
GCTCGCGCTGCTGACCGGGCCGGACCTCGCGCAGTTCGCGCAGCGGATGTCGTCGCAGTTCGCGCGCGTG
CGCGTCGATGACCTGAAGCACAAGTTCGACGAGATCGCCGCGGGTTCGAGCGAGGCCGAGCCGCGGCACG
CGGACGCCGATGTCGCGGTGCCCGACGGCGCCGCCGCTTCGGGCGATGCGCCGCGCGGCCCGTCGAAGAC
GCCGGCGCTCGACACGTACACGACGAACCTCACGCAGCGCGCGCGCGAGGGCAAGATCGACCCGGTGATC
GGCCGCGATGCGGAGATCCGCCAGGCGATCGACATCCTGATGCGCCGCCGGCAGAACAATCCGATCATGA
CGGGCGAGGCGGGCGTGGGCAAGACGGCCGTCGTCGAAGGGCTCGCGCTGCGCATCGCGGCCGACGACGT
GCCGCCGCCGCTTCGCGGCGTCGCGCTGCACGTGCTGGACATGGGCCTCCTGCAGGCGGGCGCGAGCGTG
AAGGGCGAGTTCGAGAATCGCCTGAAGAGCGTGATCGACGAGGTGAAAAAGAGCGCGCATCCGATCATTC
TCTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGGCAGGCGGGCCAGAACGATGCGGCGAACCT
GCTGAAGCCGGCGCTCGCGCGCGGCGAGCTGCGCACGATCGCGGCGACGACGTGGAGCGAGTACAAGAAG
TATTTCGAAAAGGACGCGGCGCTTGCGCGGCGCTTCCAGGTGGTGAAGATCGAGGAGCCGAGCGAGCCGC
TCGCCGCCGCGATGCTGCGCGGGATGGCGGCGCTGATGGAGCGGCACTTCAACGTGCGCGTTCTCGACGA
CGCGATCACCGAGGCGGTGCGGCTGTCGCATCGCTATATCAGCGGCCGCCAGTTGCCGGACAAGGCGATC
AGCGTGCTCGACACCGCCTGCGCGAAGGTCGCGCTCGCGCACAGCTCGACGCCCGCGGCGATCGACGACG
CGAAAAAACGCATCGAGCGGATCGACGCGGAAATCGCGGCACTCGAGCGCGAGGCCGCGAGCGGCGCCGC
GCACGATGCGCGCCTCGCCGAACTGCGCGAGGCCCGCGACGCCGATCTGAAGGCGCTGGCCGAGGACGCC
GCGCGCTACGAGGAGGAGCGCGCGCTCGTGACCGAAATCGGCGCGCTGCGCGCCGAGCTCGATGCCGCAC
GCGAGTCGTCCGCCGACGGCAAGCCCGTCGATGTCGACGCGACGCGCGCGAAGCTTGCCGAGCGCGTCGA
TGCGTTGCGCGCGCGGCAGGGCAACCAGCCGATGGTGCCGTTGCAGGTCGACGGCCACGTCGTCGCGGAG
ATCGTCGCGTCGTGGACGGGCATTCCGCTCGGCAGGATGGTGAAGGACGAGATCGAGACCGTGCTGAACC
TGCGCGATCTGCTCGGCGCGCGCGTGATCGGCCAGGACCATGCGCTCGGCGCGATCGCGCAGCGCGTGCG
CACCGCGACCGCGAACCTCGAGGATCCGAACAAGCCGCGCGGCGTGTTCATGTTCGTCGGGCCGTCGGGC
GTCGGCAAGACCGAGACCGCGCTCGCGCTCGCCGACGTGCTGTACGGCGGCGAGCGCAAGCTGATCACGA
TCAACATGAGCGAGTATCAGGAGGCGCACAGCGTGTCGGGCCTGAAGGGCTCGCCGCCCGGCTACGTCGG
CTACGGCGAGGGCGGCGTGCTGACGGAGGCGGTGCGTCGCAATCCGTATTCGGTCGTGTTGCTCGACGAA
GTCGAGAAGGCGCATCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCGCGATGGACGATG
CCGAAGGCCGTGAGATCGACTTTCGCAACACGCTGATCATCCTGACCTCGAACGTCGGCTCGTCGGCGGT
GATGCAGGCGTGCCTGAACAAGGCGCCGCAGGAGCTGCCCGATGCCGAGACGCTTGCCGAGACGCTGCGC
CCGCAGCTCTACAAGACCTTCAAGCCCGCGTTCCTCGGCCGGATGAAGGTGATTCCGTACTATCCGATCT
CCGACGACGTGCTCGCCGAGATCATCGAGCTGAAGCTCGAACGGATTCGCCGCCGGATCGAAGCGAACCA
CAAGGCGGCGTTCGAGTGGGACGAGTCGCTCGTCGATGCCGTGCTCGCGCGCTGCACCGAAGTCGATTCG
GGCGCGCGCAACGTCGATCACATCCTGAACGGCACGCTGCTGCCGGAGATCGCCGAGCTCGTGCTGTCGC
GCATCGCCGATGGCGAGGCGATCGTGCGGATCGCCGCGCGCGCGGCCGAGACGGGCGAATTCGAGTACAC
GGTCGAGTAA
 Primer design