SecReT6
Protein ID: 194291767
SecReT6 ID267
T6SS typei4b
Gene symbol-
Locus tagRALTA_B1008
StrainCupriavidus taiwanensis LMG 19424
Repliconchromosome II [GenBank: NC_010530] [Browse all T6SS(s) in this replicon]
Location [Strand]1050243..1053053 [-]
Producthypothetical protein
NoteTssI
UniProt IDB3R9P2
KEGG IDcti:RALTA_B1008
PDB IDNA
Domain hit(s) vs Pfam Phage_GPD [PF05954], Evalue: 2.70E-65, Aligned region: 45..357
Phage_GPD [PF05954], Evalue: 2.70E-65, Aligned region: 454..498
Phage_GPD [PF05954], Evalue: 2.70E-65, Aligned region: 724..764
DUF2345 [PF10106], Evalue: 4.60E-42, Aligned region: 677..824
T6SS_Vgr [PF13296], Evalue: 2.30E-34, Aligned region: 523..633
T6SS_Vgr [PF13296], Evalue: 2.30E-34, Aligned region: 726..742
Phage_base_V [PF04717], Evalue: 7.70E-17, Aligned region: 416..507
Sarcoglycan_1 [PF04790], Evalue: 0.008, Aligned region: 752..807
Protein Sequence: 936 a.a.     [Download]
>gi|194291767|ref|YP_002007674.1| unnamed protein product [Cupriavidus taiwanensis LMG 19424]
MKPLSSYPSSAMAALSGLLGQRTRQITLETALTADDLVVERFVAQESVSTPFQLHIDCLSPSAHLDTARL
ATEEITLRLMLADGSRRAWHGYVQTCAAIGGDGGLARYRLTVGTWFDHLRARTDCYVYQDKTALEIIEDV
LADYPLAQYRMAVSQPLRKRSVCCQYRETDLDFVTRLLAEEGLSYRFEHQQDGAEQSSREDKAQSRHCLV
IFDNQAERPACAQPSIRFHRSDATEHEDAIDHWSLQAATGTNAVTVASWDYKSLAATAADAGNESLGEWP
ALESFETRGTYRFPDADAARRAAQLRAQAHESCYLRYEGEGSVRALGAGERFTLTGHFDTAANEFVTLAV
RHEAANNLGAEVALLLGMSDIEAGSYRNRFEAVRADAPIVPVYSPKPTAPEGQPAVVIAEGGAPLTTERD
HRVRVRLPWLRAPMADPRADTAADPAQDDLSQVTAWVRVATAAAGPNWGVHHLPRAGTEVMLTYLDGDID
RPMVVAQLHNEQDTLPWPATEAPLNTALSGWHSHNLGDGGYNQWIVDDNTGQLRMRLASSAADTQLNLGY
VIAQPPASGERGAWRGTGAELRTDAWAIVRAGNGLLLSTTVQARAAGTMLDIREARGQITAAERTAQRLS
DAATSQQALPLGALAAFEPLTKAIDPQQDGSYPDRVNEQDARRPDTGTAAERFGQPWLVAESPSSIALAT
QATTSIFAGRHLLGLAQADWHVGADNTVAAAAAKGVSLFSQNNGIRAIAAGGPVSIQAHTDALAVMADKA
VTVTSSTDGIEVLAQKKVVLHGGSSRIVLDGNAITFETPGLLSVKGAGHPLVGGGGNAAALPALPIPASQ
PNWIEMSLLGYEGQPMRNIEYELTFADGTKRTGKLNGVAEQREEAVPWGQATLTYKNNPAAKDVPRPSLD
DLLAATEPLIREEEARLNQDQTNTTA
 
Nucleotide Sequence: 2811 bp     [Download]
>gi|188591847|ref|NC_010530.1|:c1053053-1050243 Cupriavidus taiwanensis LMG 19424 chromosome 2, complete sequence
ATGAAGCCCTTGTCCTCTTACCCGTCATCCGCGATGGCTGCCCTGTCCGGGCTGCTGGGCCAACGCACGC
GCCAGATCACGCTGGAGACGGCGCTTACCGCCGACGACCTGGTAGTGGAGCGCTTCGTCGCGCAGGAGAG
TGTCAGCACACCGTTCCAGCTGCACATCGATTGCCTGAGCCCGTCTGCACACCTGGACACCGCGCGCCTG
GCCACCGAGGAAATCACGCTGCGGCTGATGCTTGCCGACGGCAGCCGCCGCGCCTGGCACGGCTATGTGC
AAACCTGCGCGGCCATCGGCGGCGACGGTGGCCTGGCGCGCTACCGGCTGACGGTGGGGACCTGGTTCGA
TCACCTGCGCGCGCGCACCGATTGCTATGTGTACCAGGACAAGACCGCGCTGGAAATCATCGAAGACGTG
CTGGCTGACTATCCGTTGGCCCAATACCGCATGGCGGTGAGCCAGCCGCTGCGCAAGCGCTCGGTCTGCT
GCCAGTATCGCGAGACCGATCTTGACTTTGTCACGCGGCTGCTGGCGGAAGAAGGCCTGTCTTATCGCTT
CGAGCATCAACAGGACGGCGCCGAACAATCCAGCCGGGAGGACAAGGCCCAGTCCCGTCATTGCCTGGTC
ATCTTCGACAACCAGGCCGAACGCCCCGCCTGCGCGCAGCCCAGCATCCGCTTCCATCGCAGCGACGCCA
CTGAGCACGAAGACGCCATCGACCATTGGTCGCTGCAGGCAGCCACTGGCACCAACGCCGTCACCGTGGC
CTCATGGGACTACAAGTCCCTGGCCGCCACCGCCGCCGACGCCGGCAACGAAAGCCTGGGTGAATGGCCC
GCGCTGGAATCCTTCGAAACGCGCGGCACGTACCGCTTCCCCGACGCCGATGCCGCCCGCCGCGCCGCGC
AGCTGCGCGCGCAAGCGCATGAAAGCTGCTACCTGCGCTACGAGGGCGAAGGCAGCGTCCGCGCCCTGGG
CGCCGGCGAACGCTTCACGCTGACCGGGCACTTCGACACCGCCGCGAACGAGTTCGTCACGTTGGCGGTG
CGCCATGAAGCGGCCAACAACCTGGGGGCCGAGGTCGCGTTGCTGCTGGGCATGTCCGACATCGAGGCCG
GCAGCTACCGCAACCGCTTCGAAGCCGTGCGCGCCGATGCCCCGATCGTGCCGGTGTACTCGCCCAAGCC
CACCGCTCCGGAAGGACAGCCTGCCGTCGTCATCGCCGAAGGCGGCGCCCCGCTGACCACCGAGCGCGAT
CACCGCGTGCGCGTGCGCCTGCCCTGGCTGCGCGCGCCGATGGCCGATCCCAGGGCCGACACCGCCGCCG
ACCCGGCCCAGGACGACCTGAGCCAGGTCACCGCCTGGGTGCGCGTGGCGACCGCCGCAGCCGGTCCCAA
CTGGGGCGTGCATCACCTGCCCCGCGCCGGCACTGAGGTCATGCTGACCTACCTCGATGGCGACATCGAT
CGCCCGATGGTCGTGGCGCAACTGCACAACGAACAGGACACCCTGCCCTGGCCCGCCACCGAGGCGCCGC
TGAACACAGCGTTGTCCGGCTGGCATTCGCACAACCTCGGCGACGGCGGCTACAACCAGTGGATCGTCGA
CGACAACACCGGCCAGCTGCGCATGCGCCTGGCCAGCTCGGCCGCCGACACCCAGCTCAACCTTGGCTAC
GTGATCGCGCAGCCTCCCGCCAGCGGAGAACGCGGCGCCTGGCGTGGCACCGGCGCCGAACTGCGCACCG
ACGCGTGGGCCATCGTGCGCGCCGGCAACGGCTTGCTGCTGTCGACAACGGTCCAGGCCAGGGCCGCCGG
CACCATGCTCGACATCCGCGAAGCCCGCGGCCAGATCACCGCCGCCGAGCGTACCGCCCAGCGCCTGTCC
GATGCCGCCACCTCGCAGCAGGCGCTGCCGCTGGGAGCGCTCGCCGCGTTCGAACCGCTGACCAAGGCCA
TCGACCCGCAGCAGGACGGCAGCTATCCGGACCGCGTCAACGAGCAGGACGCCAGGCGCCCGGATACCGG
CACCGCTGCCGAGCGCTTCGGGCAACCGTGGCTCGTCGCGGAATCGCCCAGCTCGATTGCACTGGCCACG
CAGGCCACCACCAGCATCTTTGCCGGACGCCACCTGCTGGGACTGGCACAGGCCGACTGGCATGTCGGCG
CCGACAACACCGTCGCCGCGGCCGCGGCCAAGGGCGTGAGCCTGTTCAGCCAGAACAACGGGATTCGCGC
CATTGCGGCCGGCGGACCGGTTTCCATCCAGGCGCATACCGATGCGCTGGCAGTGATGGCCGACAAAGCC
GTGACGGTGACCTCATCGACCGACGGCATCGAGGTGCTGGCGCAGAAGAAAGTGGTGCTGCACGGCGGCT
CGTCGCGGATCGTGCTGGATGGGAATGCGATTACGTTTGAGACACCGGGGTTGTTGTCGGTGAAGGGGGC
TGGGCATCCGTTGGTGGGGGGTGGGGGGAATGCCGCGGCGTTGCCGGCGTTGCCAATTCCAGCAAGTCAG
CCCAACTGGATCGAGATGAGCCTGCTGGGCTATGAAGGTCAGCCTATGCGCAACATCGAATACGAACTCA
CGTTTGCCGACGGCACCAAGCGTACGGGCAAGCTGAATGGCGTTGCCGAGCAGCGGGAAGAAGCCGTGCC
ATGGGGTCAAGCCACGCTCACGTACAAGAACAACCCGGCTGCAAAGGACGTGCCCCGGCCCTCTCTGGAT
GACCTGCTGGCGGCCACTGAACCGCTCATCCGTGAAGAGGAAGCACGGCTAAACCAGGACCAGACGAATA
CGACCGCATGA
 Primer design