SecReT6
Protein ID: 253991260
SecReT6 ID358
T6SS typei3
Gene symbol-
Locus tagPAU_03787
StrainPhotorhabdus asymbiotica subsp. asymbiotica ATCC 43949
Repliconchromosome [GenBank: NC_012962] [Browse all T6SS(s) in this replicon]
Location [Strand]4393068..4394231 [+]
Productouter membrane protein, ompa/motb family
NoteTssL
UniProt IDB6VLA1
KEGG IDpay:PAU_03787
PDB IDNA
Domain hit(s) vs Pfam DUF2077 [PF09850], Evalue: 1.00E-58, Aligned region: 7..212
OmpA [PF00691], Evalue: 2.30E-17, Aligned region: 274..372
Protein Sequence: 387 a.a.     [Download]
>gi|253991260|ref|YP_003042616.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
MNHNYRNPLVQAAYPLLNAMPHIRHTAKLEDSSQLRQQLIGEMYRFEKQCQQQGFSYETILGARYCLCTC
LDEAVALTSWGSDSIWSGNGLLVTFHKESSGGEKFFKLLDMLLEQPAKHIDLLELFYFCLLLGFGGRYRL
IDNGLAQLETLTQRLAIRLRQVRGEYSVALSTLPPLPVNTHQTSRLTHFLVFCSLSGVLLTGSLYIGLNT
RLDQQTEPVLTSIYDLPLPEAALPTESFSIAHLRQVLQPMIEQQDITVSQNADNVSVTLQGGGLFASASA
TLNPLYQTPLQELAKQLNLTTGKVIVRGHSDNLPIHTHTYSSNYALSLARAETVAQQLRTNLLQPQRLQV
ESAGAEAPLVPNTTAKNRALNRRIEIIFNTQSDNSGQ
 
Nucleotide Sequence: 1164 bp     [Download]
>gi|253987483|ref|NC_012962.1|:4393068-4394231 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 chromosome, complete genome
ATGAATCATAACTACCGTAACCCATTGGTACAGGCAGCTTATCCACTATTAAATGCGATGCCACATATTC
GCCACACCGCAAAACTAGAAGATTCCAGTCAGTTACGCCAACAACTGATTGGAGAAATGTATCGCTTTGA
GAAACAGTGCCAGCAACAGGGATTCAGCTACGAAACGATTCTCGGCGCCCGTTATTGTCTGTGCACTTGT
TTAGATGAAGCAGTCGCATTGACCTCTTGGGGAAGCGATAGCATATGGTCAGGTAATGGCCTGTTGGTGA
CATTCCATAAAGAGAGCAGTGGTGGTGAAAAGTTTTTCAAGCTACTGGATATGTTGCTGGAACAACCAGC
CAAACATATCGATTTACTCGAACTGTTCTACTTTTGTCTGTTACTGGGATTTGGTGGACGTTATCGCTTG
ATTGATAACGGCCTGGCTCAATTAGAAACCCTCACCCAGCGCCTGGCAATACGTCTGCGTCAAGTGCGAG
GGGAATATTCCGTGGCATTAAGCACTCTTCCGCCTCTCCCTGTCAACACACATCAGACATCACGGTTAAC
CCATTTTTTGGTGTTTTGCTCGCTGTCTGGAGTACTGCTGACTGGTTCACTCTACATCGGATTAAACACC
CGGCTTGATCAACAAACAGAACCCGTGTTGACATCCATATACGACCTGCCACTACCAGAAGCGGCATTAC
CGACTGAAAGTTTCTCTATTGCTCATTTGCGGCAGGTTCTGCAACCGATGATTGAACAACAGGATATCAC
CGTCAGCCAGAACGCAGATAATGTCAGCGTAACCCTACAGGGAGGCGGCTTATTTGCTTCTGCATCAGCG
ACACTTAATCCACTCTATCAGACACCTCTCCAGGAGCTGGCTAAACAACTGAACCTGACGACTGGTAAGG
TTATCGTTCGTGGGCATAGTGATAATCTGCCGATTCATACACATACCTACTCCTCTAACTATGCGCTGTC
ATTGGCGCGAGCAGAAACGGTAGCACAACAGTTACGCACTAACTTGCTCCAACCACAACGGCTACAGGTT
GAAAGTGCTGGCGCAGAAGCTCCTTTAGTCCCCAACACCACCGCCAAAAATCGGGCTTTGAACCGCCGGA
TTGAAATTATTTTCAACACCCAGTCGGATAATTCAGGCCAATAG
 Primer design

Protein ID: 253991308
SecReT6 ID358
T6SS typei3
Gene symbol-
Locus tagPAU_03835
StrainPhotorhabdus asymbiotica subsp. asymbiotica ATCC 43949
Repliconchromosome [GenBank: NC_012962] [Browse all T6SS(s) in this replicon]
Location [Strand]4459238..4459888 [-]
Producthypothetical protein
NoteTssL
UniProt IDC7BMP4
KEGG IDpay:PAU_03835
PDB IDNA
Domain hit(s) vs Pfam DUF2077 [PF09850], Evalue: 1.20E-41, Aligned region: 17..207
Protein Sequence: 216 a.a.     [Download]
>gi|253991308|ref|YP_003042664.1| hypothetical protein PAU_03835 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
MNKMISIDDLMLGIGILVIALRNGDKSVHGEALYQKGVELIESAQQQLSESDVSEDDMTHMIYALCALLD
ETVLSRPGRDNGHETWSKTLLQTRFFNTHHAGERLFERIRQVLNQSQPSLMVLTCFQRVLALGFQGGDNE
QIAQERQSLLDVLTQRAGEMVVQPYQTIQTNACRRQGKFWRSRSLWFWGCQAMGVIALMWLGLHFYLQQY
LSAGQG
 
Nucleotide Sequence: 651 bp     [Download]
>gi|253987483|ref|NC_012962.1|:c4459888-4459238 Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 chromosome, complete genome
ATGAACAAAATGATCTCAATCGACGACCTGATGCTTGGCATTGGGATATTGGTGATTGCACTGAGAAACG
GTGATAAGTCGGTGCATGGTGAGGCGTTATATCAAAAAGGGGTTGAGTTGATAGAAAGTGCACAGCAGCA
ATTAAGTGAAAGTGATGTTAGTGAAGATGACATGACTCACATGATCTATGCCTTGTGCGCATTGCTGGAT
GAAACCGTACTCAGTCGTCCTGGCCGGGATAATGGTCATGAAACTTGGTCGAAAACGCTGTTGCAGACGC
GATTTTTTAATACTCATCATGCCGGTGAGCGGTTGTTTGAACGTATCCGTCAGGTATTGAATCAATCGCA
ACCTTCCTTGATGGTACTGACTTGTTTCCAGCGCGTATTAGCACTGGGTTTTCAGGGGGGTGATAACGAG
CAGATTGCACAGGAGCGCCAGTCATTACTGGATGTATTGACTCAGCGTGCGGGGGAAATGGTGGTGCAAC
CATATCAAACGATACAGACAAATGCATGTCGTCGTCAGGGAAAATTCTGGCGTTCACGCTCTCTGTGGTT
CTGGGGGTGTCAGGCAATGGGCGTGATAGCTTTGATGTGGTTGGGCTTGCATTTCTATCTTCAGCAATAT
TTGTCTGCTGGGCAAGGCTAA
 Primer design