| Protein ID: 296273287 |
 SecReT6 ID | 397 |
| T6SS type | i1 |
| Gene symbol | - |
| Locus tag | Arnit_1757 |
| Strain | Arcobacter nitrofigilis DSM 7299 |
| Replicon | chromosome [GenBank: NC_014166] [Browse all T6SS(s) in this replicon] |
| Location [Strand] | 1754154..1757060 [+] |
| Product | Rhs element Vgr protein |
| Note | TssI |
| UniProt ID | D5V1H7 |
| KEGG ID | ant:Arnit_1757 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | Phage_base_V [PF04717], Evalue: 4.80E-17, Aligned region: 435..510 Phage_GPD [PF05954], Evalue: 1.50E-16, Aligned region: 66..340 |
| Protein Sequence: 968 a.a. [Download] |
| >gi|296273287|ref|YP_003655918.1| unnamed protein product [Arcobacter nitrofigilis DSM 7299] MSKEIIRNNVEEIEEGLKSGVNLKELRREVKQDINARIKLLNYKPNATVGIIDGSFNVYKLLGSSSVNTP YSFTITFVSDDFINIEDIVDTDIELNIKDNVNPLIKKTIYGKIFKASEDSIVAKKHLYIIEVVSPIYYLS LNNKYEIFHNKKTSDIIVEIINRYNQLLNLKIDIKLDLIKAPTKEYTTQYNQNDLEFIQMLCEKEGYSLI LDYSSNDPYTITLCELNEHAIVNTYSSTCSFNHSKEFKSTNYVQDFYDKDKPSLQYKIQTGSSITSSVED NESTRQLRTDIKREKFRDKLNVLDESYYKDLNRYSKIDSQREYVKSNIIKGTSEELNINDSLCITLEDEK ANKHIDSIILEVKYEGFFPNALDEYKQNIDESKKHQLQYEVEFTAIPKDIIYKPPYKIKKPKINSIQTAI VSNGNSNTKDYTNTIDVDEQGRIKVLFHFETNQITSCYLRLSNMFSGDGYGSQFLPRVNSEVIVSFINGD PDLPIIIGTLHNGENKNPYNLPKEKTKSFIKTHSIPQYEDKIGYNEIAFEDKRGDENLSLRAQKDMNTLV LNNEFKHIENNSKTIINNDKEETVEANSILTINKDYTQNIKENQINTVEKEKLTTVKEDYEIHALKDLNT IVKNDIKTIVEKDMITRVKGTSTEYIEKDVKKKYLENLFTQVGKDYRLDVQNNYHLKSNNIKLNADIIEL IAETGVTLRCGGNVLTVNQSGIHLKSGNIDTTSSNGGVNAQDVAKPLIKKPLYEKIRVISLDATVTKQNT IDEALTFTATVEKYENDAWSQTTDLNETQLAQLQWYFIKNNDESDTDIITDNPTNDNITINGLTLTVNVQ EDNIYKWGHAHCYVVNSEEEGYAISELERYLEVEDIKGSYPKKEEGKCKAILNVEEPRDEELAQIRWTVE GREESKYNGQVIINHNLKDEKAYEINFQAYIEGKKEDAANGRLYYDENKNQEVKSNTK |
| Nucleotide Sequence: 2907 bp [Download] |
| >gi|296271545|ref|NC_014166.1|:1754154-1757060 Arcobacter nitrofigilis DSM 7299 chromosome, complete genome ATGTCAAAAGAGATAATAAGAAATAATGTAGAAGAGATAGAAGAGGGACTAAAGAGTGGGGTAAACTTAA AAGAGCTTAGACGTGAAGTTAAACAAGATATAAATGCAAGAATAAAACTATTAAACTATAAACCAAATGC TACAGTTGGCATTATAGATGGAAGTTTTAATGTTTATAAACTTTTAGGTTCTAGTAGTGTTAATACTCCT TACTCTTTTACTATTACTTTTGTTAGTGATGATTTTATTAATATTGAAGATATTGTTGATACTGATATTG AGTTAAATATTAAAGATAATGTTAATCCTTTAATTAAAAAAACAATATATGGTAAAATATTTAAAGCTAG TGAAGATTCTATTGTTGCAAAGAAACATCTTTATATTATAGAAGTTGTATCTCCTATTTATTATCTTAGT TTAAATAATAAATATGAGATATTTCACAATAAAAAAACATCTGATATTATTGTTGAGATAATAAATAGAT ATAACCAATTATTAAATTTAAAAATAGATATTAAATTAGATTTAATTAAAGCTCCAACTAAAGAGTATAC AACTCAATATAATCAAAATGATTTAGAGTTTATTCAAATGCTTTGTGAGAAGGAGGGTTATAGTTTAATT CTTGATTATTCTTCTAATGATCCATATACTATAACTCTTTGTGAATTAAATGAACATGCTATTGTAAATA CTTATTCTTCTACTTGTAGTTTTAATCATAGTAAAGAGTTTAAATCTACAAACTATGTACAAGACTTTTA TGATAAAGATAAACCAAGTTTACAATATAAAATCCAAACAGGTTCTAGTATAACTTCTAGTGTTGAAGAC AATGAAAGTACTAGACAGTTAAGAACTGATATAAAAAGAGAAAAGTTTAGAGATAAGTTAAATGTATTAG ACGAGTCTTATTATAAAGACTTAAATAGATACAGTAAAATAGACTCTCAAAGGGAATATGTAAAATCAAA TATTATAAAAGGAACTTCTGAGGAGTTAAATATAAATGACTCATTATGTATAACATTAGAAGATGAAAAA GCAAATAAGCATATTGATTCTATTATCTTAGAAGTAAAATATGAAGGCTTCTTTCCAAATGCTTTAGATG AGTATAAACAAAACATAGATGAGAGTAAAAAACATCAACTTCAATATGAAGTAGAATTTACAGCCATTCC AAAAGATATAATATATAAACCACCATATAAAATAAAAAAGCCTAAAATAAACTCAATACAAACAGCAATA GTATCTAATGGCAATTCTAATACAAAAGATTATACTAATACAATAGATGTGGATGAACAAGGTAGAATAA AAGTATTGTTTCACTTTGAGACTAATCAAATAACTTCTTGTTATTTAAGATTATCAAATATGTTTAGTGG TGATGGATATGGTTCTCAATTTCTTCCAAGAGTTAACTCTGAAGTAATAGTAAGCTTTATAAATGGTGAT CCAGATTTACCTATTATAATAGGAACTTTGCATAATGGTGAAAATAAAAATCCATATAATCTTCCAAAAG AGAAAACAAAATCTTTTATAAAAACCCATTCTATTCCACAATATGAAGACAAAATAGGGTACAACGAAAT AGCCTTTGAAGATAAAAGAGGAGATGAGAATTTATCTTTAAGAGCACAAAAGGATATGAATACCCTTGTA CTTAATAATGAGTTCAAACATATAGAGAATAATTCAAAGACTATTATTAATAATGACAAAGAAGAGACTG TAGAAGCTAATTCTATTTTAACTATAAATAAAGACTATACCCAAAATATAAAAGAAAATCAGATAAATAC TGTAGAAAAAGAAAAACTTACTACTGTTAAAGAAGATTATGAAATTCACGCACTTAAAGATTTGAACACT ATTGTTAAGAATGACATTAAGACTATTGTGGAAAAAGACATGATAACAAGAGTAAAAGGAACTTCAACAG AGTATATAGAAAAAGATGTAAAGAAAAAATACTTAGAAAATCTATTTACTCAAGTAGGAAAAGACTATAG ACTTGATGTTCAAAATAACTATCATCTTAAAAGTAATAATATAAAATTAAATGCAGATATTATAGAACTA ATAGCAGAAACAGGAGTTACTTTAAGATGTGGGGGAAATGTATTAACAGTAAATCAAAGTGGAATACACC TAAAATCAGGAAATATCGATACAACTTCAAGTAATGGTGGAGTAAATGCACAAGATGTTGCAAAACCACT TATTAAAAAACCATTGTATGAAAAGATAAGAGTAATCTCTTTAGATGCTACAGTTACAAAACAAAATACT ATAGACGAAGCATTGACTTTCACAGCAACAGTAGAAAAATATGAAAATGATGCATGGAGTCAAACAACTG ATTTAAACGAAACCCAATTAGCTCAACTGCAATGGTACTTCATAAAAAACAATGATGAAAGTGATACTGA CATCATAACAGATAATCCAACAAATGATAATATCACAATAAATGGTCTTACTCTTACAGTAAATGTTCAA GAAGACAATATATATAAATGGGGACATGCGCATTGTTATGTTGTAAATAGTGAAGAAGAAGGTTATGCAA TAAGTGAACTTGAAAGATATCTTGAAGTGGAAGATATCAAAGGTTCTTACCCAAAAAAAGAAGAGGGTAA ATGTAAAGCTATATTAAATGTAGAAGAACCAAGAGATGAAGAGTTAGCACAAATAAGATGGACAGTAGAA GGAAGAGAAGAATCAAAATATAATGGACAAGTGATAATCAATCATAACCTTAAAGATGAAAAAGCATATG AAATAAACTTCCAAGCATATATTGAAGGCAAAAAAGAAGATGCTGCCAATGGAAGACTTTATTATGATGA AAATAAAAATCAAGAAGTAAAAAGCAATACAAAATAA |
 Primer design |