SecReT6
Protein ID: 319778098
SecReT6 ID416
T6SS typei3
Gene symbol-
Locus tagMesci_6378
StrainMesorhizobium ciceri biovar biserrulae WSM1271
Repliconplasmid pMESCI01 [GenBank: NC_014918] [Browse all T6SS(s) in this replicon]
Location [Strand]322129..325668 [-]
Producttype VI secretion protein icmf
NoteTssM
UniProt IDE8TPW9, E8TPW9
KEGG IDmci:Mesci_6378
PDB IDNA
Domain hit(s) vs Pfam ImcF-related_N [PF14331], Evalue: 2.90E-84, Aligned region: 191..449
ImcF-related_N [PF14331], Evalue: 2.90E-84, Aligned region: 465..488
IcmF-related [PF06761], Evalue: 9.40E-69, Aligned region: 513..803
DUF1215 [PF06744], Evalue: 1.60E-31, Aligned region: 920..1039
Protein Sequence: 1179 a.a.     [Download]
>gi|319778098|ref|YP_004134528.1| type VI secretion protein icmf [Mesorhizobium ciceri biovar biserrulae WSM1271]
MFILRFLWAVLTSRWLWTLIGLTLLSLVIWVFGPIVRVGPYEPFASDNVRIVIIALLVIFWLTWLIVAQR
RAIRANRMFVAEIAAPVVEKPLRPGEENVAAVGAKFAEVMAELKRRKLGGRKFLREMPWYVIVGPPATGK
TTALRQSGLNFPIDLTEDLQGVGGTRNCDWFFSEHAVLIDTAGRYVQQESQPDVDAVEWLGFLDLLKKHR
GRRALNGVIVALSIDVLWEGDEAIKAHGRKIRRRLAELNDRLEIRLPVYLMLNKADLIKGFEAFFGGLST
ASREQVWGTTFALEARVDAKTIEREISALATELERRLVPRLEDEDKLAARAEIFRFPAQLASLSEPIQVL
VEAMFGESRYEEVAWLRGLYLTSATQEGAPIDRLTAALSSSFGLPPRRALPAPRVEKRSFFLKNLLTEVI
FKEAGLGTFDPLAQRRRAWIWRGAAAACAAAALLAGGLFTWSYFDNRNAITAQAGQFEALQTPLTSIAAT
PASVEQPAMDGALGAMDAVATARTAPPGAAQDLLGPSASAEMVRAQTDTYDHALRNILEPRMIALLEATM
WRQIRDPDFMLGALKTYRMMTGLSQMDPDYAQDWWANSLPEFAAAAPFPTADAEEHQLAAIRRMTVDESY
VAPDQALVAEALKTVCTISLPARAYKQLLADPAVAGLKEWIPANFAGPNGSKVFARRSAKTLRVGISGAF
TYAGFHDVILDRIDDVAAQAALDRAVFAGGCSENSETSVSALSEDILKLYYDDYIAQWDSFLRDMRLAPL
TDLIVASENLKDLSSADSALKRLLTAVVQETELTRSDDAPAGDDKAAAKGGSKLLGKLGKLGKIVKTGAK
LLPRAGSASEVDLTGNLVAEHFKPLKSTIAEVDGQPPALDAAVVALTALSNVLQTVTANPNPQDAIKKQG
GLAELTGAVARQAQILPDPISIWLGGIAGDTSNLTQKAVTSELNAIWRADILPFCQAALNDRYPFSAESA
VDVNVRDFARLFGPAGLIDGFINDHLINYVDMTSQPWKWRADFGLDGSALAAFEQARHIRDDLFAGGSGP
VMSFTLEPKDLSPNVTRVTLNLDGQSLVYYNNATRPQPMTWPGKDGTGVISLAFQPIDGSPEIMLNETGS
WAWLRMLRSGRFASTSLTDVYSLRLGTKGMYADFELKAASVENPYNLEMFKKFTCPPQI
 
Nucleotide Sequence: 3540 bp     [Download]
>gi|319777789|ref|NC_014918.1|:c325668-322129 Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence
ATGTTCATCCTGCGCTTCCTTTGGGCTGTCCTGACATCACGCTGGCTATGGACGCTGATCGGCCTCACGC
TGCTTTCCCTGGTCATCTGGGTGTTCGGTCCGATCGTCAGGGTCGGTCCCTATGAACCGTTCGCCTCTGA
TAACGTGCGCATCGTCATCATTGCGCTGCTGGTCATCTTCTGGCTGACCTGGCTGATCGTCGCCCAGCGC
CGGGCGATCCGCGCCAACCGCATGTTCGTCGCCGAGATTGCCGCGCCGGTGGTGGAAAAGCCGCTCAGAC
CCGGCGAAGAGAATGTCGCGGCCGTCGGTGCCAAGTTCGCCGAGGTGATGGCCGAACTGAAGCGCCGCAA
GCTGGGCGGACGAAAGTTTCTGCGCGAAATGCCATGGTATGTGATCGTCGGGCCGCCGGCCACCGGCAAG
ACCACGGCCTTGCGGCAGTCCGGGCTGAATTTTCCGATCGACCTCACCGAGGACCTGCAGGGGGTCGGCG
GCACGCGCAACTGCGACTGGTTCTTTTCCGAACATGCGGTTCTGATCGACACCGCCGGCCGTTATGTCCA
GCAGGAGAGCCAGCCCGATGTGGACGCGGTTGAATGGCTGGGCTTCCTCGACCTGTTGAAAAAGCACCGC
GGACGCCGCGCGCTGAATGGCGTAATCGTCGCGCTTTCGATCGACGTGCTTTGGGAGGGCGATGAAGCCA
TCAAGGCGCACGGCCGCAAGATCCGCCGCCGGTTGGCCGAACTCAACGACCGGCTCGAAATCCGCCTTCC
GGTCTATCTGATGCTGAACAAGGCCGATCTGATCAAGGGTTTCGAGGCTTTCTTCGGCGGCTTGTCCACG
GCTTCGCGCGAGCAGGTATGGGGGACCACCTTCGCGCTGGAAGCGCGTGTCGATGCGAAGACCATTGAAC
GGGAAATTTCCGCGCTGGCGACGGAACTTGAGCGGAGGCTGGTGCCGCGGCTGGAAGATGAGGACAAACT
CGCCGCCCGTGCCGAGATTTTCCGCTTTCCCGCCCAACTGGCAAGCCTGTCCGAACCGATACAGGTGCTG
GTCGAGGCAATGTTCGGCGAAAGCCGGTATGAAGAGGTCGCGTGGTTGCGCGGGCTCTATCTGACATCGG
CGACGCAGGAAGGAGCGCCCATCGACCGGCTGACCGCGGCGCTGTCTTCGTCCTTCGGCCTGCCGCCGCG
ACGGGCGCTGCCCGCACCAAGGGTCGAAAAACGCAGCTTCTTCCTGAAGAACCTGCTGACCGAAGTCATC
TTCAAGGAAGCGGGCCTCGGCACGTTCGATCCGCTGGCGCAACGGCGCCGCGCCTGGATCTGGCGGGGTG
CGGCAGCCGCTTGCGCGGCGGCGGCATTGTTGGCCGGCGGGTTGTTCACCTGGTCCTATTTTGACAACCG
CAACGCGATAACGGCCCAGGCAGGCCAGTTCGAAGCGCTGCAGACGCCGCTGACCTCCATCGCTGCAACG
CCGGCATCGGTGGAGCAGCCCGCCATGGACGGCGCGCTCGGTGCGATGGACGCGGTCGCAACCGCCCGGA
CAGCACCGCCTGGCGCCGCCCAGGATCTACTGGGACCATCGGCCTCCGCGGAAATGGTGCGGGCGCAGAC
CGACACGTACGATCATGCCCTGCGCAATATTCTTGAGCCACGCATGATCGCCTTGCTCGAGGCGACGATG
TGGCGGCAGATCCGCGACCCGGATTTCATGCTCGGAGCGCTGAAAACCTATCGCATGATGACGGGCCTGT
CTCAGATGGATCCCGATTACGCCCAAGACTGGTGGGCGAACAGCTTGCCCGAATTCGCGGCCGCGGCACC
ATTTCCGACCGCCGATGCCGAAGAGCATCAGCTTGCCGCCATCCGCCGGATGACGGTCGACGAGAGCTAT
GTCGCGCCCGACCAGGCCCTGGTTGCCGAAGCGCTGAAAACGGTGTGTACCATTTCGTTGCCGGCGCGCG
CCTACAAACAGTTGCTGGCCGATCCGGCAGTGGCCGGGCTCAAGGAGTGGATCCCGGCGAATTTCGCCGG
CCCCAACGGCAGCAAGGTGTTCGCGCGGCGTTCCGCCAAGACGCTTCGCGTCGGCATTTCCGGAGCATTC
ACCTATGCCGGCTTTCACGACGTCATTCTCGATCGCATCGACGATGTCGCCGCACAGGCGGCGCTCGATC
GTGCCGTTTTCGCTGGCGGCTGCTCAGAGAACTCCGAAACCTCGGTCTCGGCGCTGTCCGAGGATATTCT
GAAGCTCTACTATGACGACTATATCGCGCAATGGGACAGCTTCCTGCGCGACATGAGGCTCGCGCCATTG
ACCGATCTCATCGTCGCCAGTGAGAACCTCAAGGATCTTTCGAGCGCCGATTCCGCGCTGAAGCGCCTGC
TGACGGCAGTGGTGCAAGAGACGGAGCTCACCCGTTCGGATGACGCGCCCGCCGGAGATGACAAGGCGGC
AGCCAAAGGCGGCTCGAAACTGCTCGGCAAACTGGGCAAGCTTGGCAAGATAGTGAAAACAGGGGCAAAA
CTGTTGCCACGGGCGGGTTCGGCCAGCGAGGTGGACCTGACCGGCAATCTTGTGGCCGAACATTTCAAAC
CACTCAAGAGCACCATTGCCGAGGTCGATGGCCAGCCGCCGGCACTGGATGCCGCGGTCGTCGCGCTGAC
CGCGCTATCCAACGTGCTGCAGACGGTCACCGCGAACCCCAATCCGCAGGATGCTATCAAGAAGCAGGGC
GGCCTTGCCGAACTGACGGGAGCGGTCGCCCGGCAGGCACAGATCCTGCCCGACCCTATCAGCATTTGGC
TGGGCGGGATTGCCGGCGACACCAGCAATTTGACTCAGAAGGCGGTCACTTCGGAGCTCAATGCCATCTG
GCGGGCCGATATCCTGCCTTTCTGCCAGGCGGCGCTGAACGACCGCTATCCGTTCAGCGCCGAGAGCGCG
GTGGACGTGAACGTACGGGATTTCGCCCGCCTCTTTGGGCCGGCCGGGCTGATCGACGGTTTCATCAACG
ACCATCTGATCAACTATGTCGACATGACCAGCCAGCCATGGAAATGGCGCGCCGATTTCGGCCTTGACGG
TTCGGCCTTGGCGGCGTTCGAGCAGGCCAGGCACATCCGCGACGATCTATTTGCGGGCGGCAGCGGACCC
GTGATGAGCTTCACGCTTGAACCGAAGGACCTGTCTCCCAACGTCACGCGCGTCACGCTCAATCTCGATG
GCCAGAGCCTCGTCTACTACAACAACGCAACGCGGCCGCAACCCATGACATGGCCCGGCAAGGACGGCAC
GGGCGTCATCTCGCTCGCCTTCCAGCCGATCGACGGATCGCCTGAAATAATGCTCAACGAAACCGGCAGC
TGGGCGTGGCTGAGGATGCTCCGCAGTGGCCGCTTCGCCAGCACTTCGCTGACCGACGTCTACAGCCTGC
GTCTGGGCACGAAAGGCATGTACGCCGATTTCGAGCTCAAGGCCGCCAGCGTCGAAAATCCGTACAACCT
CGAAATGTTCAAGAAGTTCACATGTCCGCCGCAGATATGA
 Primer design