SecReT6
Protein ID: 386336095
SecReT6 ID620
T6SS typei4b
Gene symbol-
Locus tagRSPO_m01093
StrainRalstonia solanacearum Po82
Repliconmegaplasmid [GenBank: NC_017575] [Browse all T6SS(s) in this replicon]
Location [Strand]1230234..1233446 [+]
Productvgr-related protein
NoteTssI
UniProt IDF6G9E1
KEGG IDrsn:RSPO_m01093
PDB IDNA
Domain hit(s) vs Pfam Phage_GPD [PF05954], Evalue: 5.60E-55, Aligned region: 37..354
Phage_GPD [PF05954], Evalue: 5.60E-55, Aligned region: 735..786
DUF2345 [PF10106], Evalue: 1.40E-39, Aligned region: 177..202
DUF2345 [PF10106], Evalue: 1.40E-39, Aligned region: 767..927
T6SS_Vgr [PF13296], Evalue: 1.80E-34, Aligned region: 167..192
T6SS_Vgr [PF13296], Evalue: 1.80E-34, Aligned region: 613..723
T6SS_Vgr [PF13296], Evalue: 1.80E-34, Aligned region: 824..861
T6SS_Vgr [PF13296], Evalue: 1.80E-34, Aligned region: 886..907
Phage_base_V [PF04717], Evalue: 6.40E-18, Aligned region: 450..548
Protein Sequence: 1070 a.a.     [Download]
>gi|386336095|ref|YP_006032265.1| vgr-related protein [Ralstonia solanacearum Po82]
MDVTILLQNLFAPARRLYALEGEGPITELAVEARLGREALSELSEWRVVAVSANARIVLDAFIGQRVTLV
TTLAGGTQARRTGLIRQAEQLGADGSLARYRLTVVPWSWLTTQQRHSQVFQNRPLADILEQVLSPYEPYA
SWRFAAGAEDRMAAFGTRRRLTQLRETDYHFATRLLAEAGLGFTTVEDDQALSGHTLLIFADSSRLAEDT
ESAAGGGIRYHRAHSQEERDAIQQLICHSRVSIDGVAVSAWDAEAKRSVRGHAPARFGGGMGCPDPYLSI
SPSLAPDRANAQRIAEQAMESVEARCGLFIGRGTVRTLRSGTRLKVVDCPHLPQDVHGPYPLLMDLVEHC
GINNLTADTQATLGQKLGGLEAALTFDTPPSPLESGPGPFGFTRQDEPTERLTPTGELRAAAHAHGYAGQ
FRACDARRPWRAVVSHASTSRLYSAPTVKGVHSAIVVGPDGQTEAGGDGEHHTNPRGQIRVRLPWQQGER
PDDRSTGWVPVAQRQAGAGMGWQWLPRIGQEVLLKCLEDDIDQMVVIGVLYNGQGEAGLAPTPGGRAAKG
QIQGDRESLYRLGSDSASSAQANLAGGQSPAWHGMGTDPEGHRNAAALSGFKSAEHGGRGYSQLVFDDSD
GQLRTQLATTQAYSQLNLGHLIHQQDNRRGSFRGQGFELRTDGYGAVRGQAGLLVTTYRDAVSGQAVPTG
DNAAGIALIKQAKQLTASLSQGAVTHQTAALSTAKDDTAPLAKQEKAALGMVDGKALDTAKQDAVSGNTT
TQGKVPHQGEAMAQLAGRAGLVAVAGQDLQFANGESLALASGQDTNVAVGKQARVHAGQGIGVAAGLSQA
GDGNIGLQLTAGQDDIDVQAQHDALNLLSEQGLKLVSANLNVDFAAAKRIRLATAEGASITLENGNITVE
CPGPITYKAAQRTFEGPVNQSYPLPAFPDQRIEDVPVHFNVNMQDVPGPSGAAISLADWRIVKADGEFAA
LYSEDARGYTVGNHAAQRNGPLDGRLGRQLARGDEGDAALGFTPGQDWRADFGAGWCRRSSAAVRQAAAR
GISRLRRQRRLVGFADSADH
 
Nucleotide Sequence: 3213 bp     [Download]
>gi|386335008|ref|NC_017575.1|:1230234-1233446 Ralstonia solanacearum Po82 megaplasmid, complete sequence
ATGGACGTAACGATCCTTCTCCAGAACCTCTTCGCCCCCGCCCGCCGCCTGTACGCGCTGGAAGGCGAGG
GCCCGATCACGGAACTGGCAGTGGAAGCCCGGCTCGGCCGCGAGGCGCTGTCCGAGCTGTCCGAATGGCG
TGTGGTGGCGGTCAGCGCCAATGCCCGCATCGTGCTCGATGCGTTCATCGGCCAGCGCGTGACGCTGGTC
ACCACGCTGGCCGGCGGCACGCAGGCCCGGCGCACCGGCCTGATCCGCCAGGCCGAGCAGCTCGGCGCCG
ACGGCAGCCTCGCGCGCTATCGCCTCACCGTGGTGCCGTGGTCCTGGCTCACCACCCAGCAGCGCCACAG
CCAGGTGTTCCAGAACCGGCCGCTGGCGGACATCCTCGAGCAGGTGCTGTCGCCGTATGAGCCCTATGCT
TCGTGGCGCTTCGCCGCAGGCGCCGAAGACCGCATGGCCGCGTTCGGCACGCGCCGCCGCCTCACCCAGC
TCCGCGAGACCGACTATCACTTCGCCACCCGCCTGCTGGCCGAGGCCGGCCTGGGCTTCACCACCGTCGA
GGACGACCAGGCCCTCAGCGGCCACACGCTGCTGATCTTCGCCGACAGCAGTCGGCTGGCCGAGGATACC
GAGTCCGCCGCCGGCGGCGGCATCCGCTACCACCGCGCGCACAGCCAGGAGGAACGCGACGCCATCCAGC
AGTTGATCTGCCACAGCCGGGTCAGCATCGACGGTGTAGCGGTATCGGCCTGGGACGCCGAGGCCAAGCG
CAGCGTGCGCGGCCATGCGCCGGCCCGCTTTGGTGGCGGCATGGGCTGCCCCGACCCCTATCTGTCGATC
AGCCCGTCGCTGGCGCCGGATCGGGCCAACGCCCAGCGCATCGCCGAGCAGGCGATGGAGAGCGTCGAAG
CGCGCTGCGGGTTGTTCATCGGACGCGGCACGGTGCGCACACTGCGCAGCGGCACGCGGCTGAAGGTGGT
CGACTGCCCGCACCTGCCACAGGACGTGCACGGCCCGTATCCGTTGCTGATGGACCTGGTGGAGCACTGC
GGCATCAACAACCTGACCGCCGATACCCAGGCCACACTGGGCCAGAAGCTGGGCGGGCTCGAAGCCGCAT
TGACGTTCGACACGCCGCCCAGCCCACTCGAATCCGGCCCCGGCCCGTTCGGCTTTACGCGGCAGGACGA
GCCCACCGAAAGGCTTACCCCTACCGGCGAACTCCGTGCCGCTGCCCATGCCCACGGCTACGCCGGCCAG
TTCCGCGCCTGCGATGCCCGCCGCCCCTGGCGTGCAGTGGTGTCGCATGCGTCCACGAGCCGCCTATATT
CGGCGCCCACCGTGAAGGGCGTGCACAGCGCCATCGTGGTCGGCCCGGACGGTCAGACCGAGGCGGGCGG
CGACGGCGAGCATCACACCAATCCACGAGGCCAGATCCGCGTGCGCCTGCCGTGGCAGCAGGGCGAGCGG
CCGGACGACCGCAGCACCGGCTGGGTGCCGGTCGCGCAACGGCAAGCTGGCGCCGGCATGGGCTGGCAAT
GGCTGCCGCGTATCGGCCAGGAGGTATTGTTGAAGTGCCTGGAAGACGATATCGATCAGATGGTGGTGAT
CGGCGTGCTCTATAACGGCCAGGGCGAAGCGGGCCTCGCGCCGACACCGGGCGGGCGAGCCGCGAAGGGC
CAAATCCAGGGCGATCGGGAGTCGCTCTACCGCTTGGGCAGTGACAGCGCGTCCAGTGCCCAGGCCAACC
TCGCCGGCGGCCAAAGCCCGGCGTGGCACGGCATGGGCACCGATCCCGAAGGCCACCGCAACGCTGCCGC
GCTGAGCGGCTTCAAGAGCGCCGAGCACGGCGGGCGCGGCTACAGCCAACTGGTCTTCGACGACAGCGAC
GGGCAACTGCGCACGCAACTGGCCACCACGCAGGCCTACAGCCAGCTCAACCTCGGCCACCTGATCCACC
AGCAGGACAACCGGCGCGGCAGCTTCCGGGGCCAGGGCTTCGAGCTGCGCACCGACGGCTACGGCGCCGT
GCGCGGGCAGGCCGGGCTGCTGGTCACTACCTACCGCGATGCGGTCAGCGGCCAGGCCGTACCGACCGGG
GACAACGCGGCTGGCATTGCCCTCATCAAGCAGGCCAAGCAGCTCACGGCATCCTTGAGCCAAGGCGCCG
TCACCCACCAGACGGCCGCGCTGTCCACCGCCAAGGACGACACCGCACCGCTGGCCAAGCAAGAAAAGGC
AGCTCTGGGCATGGTCGACGGCAAGGCGCTCGACACGGCCAAGCAGGATGCCGTCTCAGGCAACACCACG
ACGCAAGGCAAGGTGCCGCACCAGGGCGAGGCGATGGCGCAACTGGCCGGCCGTGCGGGCCTGGTGGCGG
TGGCCGGGCAGGACCTGCAGTTCGCCAACGGCGAGAGCCTCGCGCTGGCCAGCGGCCAAGACACCAACGT
GGCGGTGGGCAAGCAGGCACGTGTGCATGCGGGGCAGGGCATCGGCGTGGCGGCGGGGCTGTCCCAGGCG
GGCGACGGCAACATCGGGCTGCAGCTGACAGCGGGGCAGGACGACATCGACGTGCAGGCGCAGCATGACG
CGCTGAATCTGCTCTCCGAGCAGGGCCTGAAGCTGGTGTCGGCCAATCTGAACGTGGACTTCGCGGCGGC
CAAGCGGATCCGGCTGGCGACGGCGGAGGGGGCGTCGATCACGCTGGAGAACGGGAACATTACGGTCGAG
TGTCCGGGGCCGATTACGTATAAGGCGGCGCAGCGCACCTTTGAGGGGCCGGTGAATCAGTCGTATCCGT
TGCCGGCGTTTCCGGATCAACGGATCGAGGATGTGCCGGTTCACTTCAATGTCAACATGCAGGACGTTCC
GGGGCCTTCGGGGGCGGCCATATCGCTTGCCGACTGGCGCATCGTGAAAGCCGATGGCGAGTTTGCCGCG
CTGTACAGCGAGGATGCCCGCGGGTACACCGTCGGCAACCACGCTGCTCAACGCAACGGGCCGCTCGATG
GCAGGCTTGGTCGGCAACTCGCCAGAGGGGATGAAGGTGACGCAGCGCTTGGGTTCACGCCCGGTCAAGA
TTGGCGCGCTGACTTCGGAGCAGGGTGGTGTCGTCGTTCAAGCGCAGCGGTCCGGCAAGCCGCCGCGCGA
GGGATATCACGCCTACGCCGGCAACGCCGGCTGGTCGGGTTCGCAGATTCTGCCGACCATTGA
 Primer design