SecReT6
Protein ID: 403521433
SecReT6 ID694
T6SS typei3
Gene symbol-
Locus tagBPC006_II0139
StrainBurkholderia pseudomallei BPC006
Repliconchromosome II [GenBank: NC_018529] [Browse all T6SS(s) in this replicon]
Location [Strand]127450..130092 [+]
ProductRhs element Vgr protein
NoteTssI
UniProt IDK7QAK3
KEGG IDbpq:BPC006_II0139
PDB IDNA
Domain hit(s) vs Pfam Phage_GPD [PF05954], Evalue: 4.30E-78, Aligned region: 25..352
Phage_base_V [PF04717], Evalue: 8.20E-25, Aligned region: 392..485
Gp5_C [PF06715], Evalue: 0.0034, Aligned region: 536..556
Gp5_C [PF06715], Evalue: 0.0034, Aligned region: 569..585
Gp5_C [PF06715], Evalue: 0.0034, Aligned region: 577..598
Gp5_C [PF06715], Evalue: 0.0034, Aligned region: 597..614
Gp5_C [PF06715], Evalue: 0.0034, Aligned region: 602..621
Protein Sequence: 880 a.a.     [Download]
>gi|403521433|ref|YP_006657002.1| Rhs element Vgr protein [Burkholderia pseudomallei BPC006]
MIRSGAMPRLLGQPALEFLSLRGEEHLGKLYTYELLLRTPDDFHVPLATSANLDLKAMIGTEMTVCIQLD
GIGTGAQGGVGAGAREISGLVVKAGFLRCEGRYNVYRIELRPWLWLATLTSDYKIFQDKSVVEIIDTVLH
DYPYPVEKRLDIDKYSVAGESARNEPRAFQVQYGETDFDFVQRLMEEWGIYWFFEHSDNKHRLVLCDHIG
GHRKAPSEAYHEIAHHPEGGKIDIEYINYFSTDEALRPGRVVIDDFDFTRPLASLVTSNHQPRETNWGEG
ELFEWPGDYTDSKHGDLISRVRMEERRATGSRAYGRGNVRGLACGHTFVLSKHKHDGANREYLVIESALM
LTEVADETGSGYRYECDNELVVQPSNEVFRMPRETPKPTTSGPQSAIVVGPPGHEVWTDEFGRVKIRFLW
DRYARNDATDSCWVRVSQAWAGVNFGGIYIPRIGQEVIVGFMNGDPDRPLILGSLYNTITPPPWDLPGDA
TKSGFKSKSITGGRENYNGIRFEDKLGAEEFHMQAEKDMNRLTKNDESHTVGANFSIGVGLTHTRAVGAM
FSSIVGGAASYAVGGAESTMIGGAYALNVGGAHAVAVGGASSVSVGGAYARNVGGAYALTVGGVLSIVCG
ASSITMTACGSIKIVGKNIRIIGSDEVVVQGAPLQLNPGDSDCGGGGGGGGGGGAIPPIPLPSFFLDITK
PILPPPPPPPTEVPPDPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT
PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPT
PTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTPTSSEI
 
Nucleotide Sequence: 2643 bp     [Download]
>gi|403521294|ref|NC_018529.1|:127450-130092 Burkholderia pseudomallei BPC006 chromosome II, complete sequence
GTGATCCGCAGCGGTGCGATGCCGCGGCTGCTCGGTCAGCCCGCGCTCGAGTTCCTGTCGCTGCGCGGTG
AAGAGCACCTCGGAAAACTCTACACGTACGAATTGCTCCTGCGCACGCCGGACGATTTTCATGTGCCGTT
GGCAACGAGCGCGAATCTCGACCTGAAGGCGATGATCGGCACGGAGATGACGGTCTGCATTCAGCTCGAC
GGAATCGGGACGGGCGCGCAAGGCGGCGTTGGCGCGGGTGCGCGCGAAATCAGCGGGCTCGTGGTCAAGG
CGGGCTTCCTGCGCTGCGAGGGGCGCTACAACGTCTATCGCATCGAGCTGCGCCCCTGGCTGTGGCTCGC
GACTTTGACGAGCGACTACAAGATTTTTCAGGACAAGAGCGTCGTCGAAATCATCGATACGGTCTTGCAC
GATTACCCTTACCCGGTCGAGAAGCGGCTCGACATCGACAAGTATTCGGTGGCGGGCGAGAGCGCTCGAA
ACGAGCCGCGCGCGTTCCAGGTGCAATATGGCGAAACCGATTTCGACTTCGTTCAGCGTTTGATGGAGGA
GTGGGGGATCTACTGGTTCTTCGAGCATTCGGACAACAAGCATCGCCTGGTCTTGTGCGATCACATCGGC
GGGCATCGCAAGGCGCCGAGCGAGGCCTATCACGAGATCGCGCATCACCCGGAAGGCGGGAAGATCGACA
TCGAGTACATCAACTATTTCTCGACGGACGAAGCGCTGCGGCCCGGCCGCGTCGTGATAGACGATTTCGA
CTTCACGCGTCCGCTCGCGAGCCTCGTCACGTCCAATCACCAGCCGCGGGAGACGAACTGGGGGGAGGGC
GAGCTGTTCGAATGGCCGGGCGACTATACCGATAGCAAGCATGGCGATCTCATCAGCCGCGTGCGCATGG
AAGAGCGCCGCGCGACCGGGTCGCGCGCATACGGTCGGGGCAACGTGCGCGGCCTCGCCTGCGGTCATAC
GTTCGTGCTGTCGAAGCACAAGCACGACGGCGCGAACCGCGAGTACCTCGTCATCGAATCGGCGTTGATG
CTGACCGAAGTCGCGGACGAAACGGGCAGCGGCTACCGCTACGAATGCGATAACGAACTGGTCGTGCAGC
CGTCGAACGAGGTGTTTCGAATGCCGCGCGAAACGCCCAAGCCGACGACGAGCGGGCCACAGTCCGCGAT
CGTGGTCGGGCCGCCGGGCCACGAGGTATGGACCGACGAATTCGGCCGCGTGAAGATCCGTTTTCTGTGG
GATCGCTACGCACGCAATGACGCAACGGATTCCTGCTGGGTACGCGTGAGCCAGGCGTGGGCCGGCGTGA
ACTTCGGCGGCATCTACATTCCGCGGATCGGACAGGAAGTGATCGTCGGATTCATGAACGGCGATCCGGA
CCGTCCGCTGATTCTCGGCAGCCTCTACAACACCATTACGCCGCCGCCTTGGGATCTGCCCGGCGACGCG
ACGAAGAGCGGATTCAAGAGCAAGTCGATCACGGGCGGGCGCGAGAACTATAACGGCATCCGCTTCGAGG
ACAAGCTGGGGGCCGAGGAATTTCACATGCAGGCGGAAAAGGACATGAACCGCCTGACGAAGAACGACGA
GTCGCATACGGTCGGCGCGAATTTTTCGATCGGCGTCGGGCTTACCCATACGCGCGCGGTGGGCGCCATG
TTCAGCAGCATCGTCGGCGGAGCCGCCAGCTATGCGGTGGGGGGCGCGGAATCGACGATGATCGGCGGCG
CGTATGCGTTGAACGTCGGCGGCGCGCACGCGGTTGCGGTGGGCGGCGCGTCGTCCGTTTCCGTTGGCGG
CGCCTACGCGCGCAACGTGGGCGGCGCGTATGCGCTGACAGTCGGCGGCGTGCTGTCGATCGTCTGCGGT
GCGTCTTCGATCACCATGACGGCTTGCGGCTCGATCAAGATCGTCGGCAAGAATATTCGCATCATCGGCA
GCGACGAAGTCGTCGTGCAAGGCGCGCCCCTGCAACTGAATCCGGGCGATTCGGATTGCGGCGGAGGGGG
CGGCGGCGGAGGCGGCGGCGGCGCGATTCCGCCGATTCCGTTGCCGTCGTTCTTCCTCGATATCACGAAG
CCGATTCTTCCGCCGCCGCCGCCGCCACCGACGGAGGTGCCACCGGATCCGACGCCGACGCCCACGCCGA
CGCCGACGCCGACGCCCACGCCGACGCCGACGCCGACGCCCACGCCGACGCCGACGCCGACGCCCACGCC
GACGCCGACGCCGACGCCCACGCCGACGCCCACGCCCACGCCCACGCCGACGCCGACGCCGACGCCGACG
CCGACGCCGACGCCCACGCCGACGCCCACGCCCACGCCGACGCCCACGCCCACGCCGACGCCCACGCCGA
CGCCCACGCCGACGCCAACGCCAACGCCAACGCCAACGCCGACGCCCACGCCCACGCCGACGCCCACGCC
GACGCCAACGCCGACGCCGACGCCGACGCCGACGCCGACGCCGACGCCCACGCCGACGCCCACGCCGACG
CCCACGCCCACGCCCACGCCGACGCCAACGCCAACGCCCACGCCGACGCCCACGCCCACGCCGACGCCGA
CGCCGACGCCAACGCCAACACCAACGCCAACTCCGACTAGTTCCGAGATTTAA
 Primer design