SecReT6
Protein ID: 410418576
SecReT6 ID710
T6SS typei3
Gene symbol-
Locus tagBN115_0779
StrainBordetella bronchiseptica MO149
Repliconchromosome [GenBank: NC_018829] [Browse all T6SS(s) in this replicon]
Location [Strand]830042..832651 [+]
ProductATPase
NoteTssH
UniProt IDK0MDR4
KEGG IDbbm:BN115_0779
PDB IDNA
Domain hit(s) vs Pfam AAA_2 [PF07724], Evalue: 1.90E-37, Aligned region: 220..300
AAA_2 [PF07724], Evalue: 1.90E-37, Aligned region: 601..767
AAA [PF00004], Evalue: 3.80E-20, Aligned region: 222..353
AAA [PF00004], Evalue: 3.80E-20, Aligned region: 607..690
ClpB_D2-small [PF10431], Evalue: 5.00E-14, Aligned region: 774..848
AAA_5 [PF07728], Evalue: 5.60E-13, Aligned region: 222..248
AAA_5 [PF07728], Evalue: 5.60E-13, Aligned region: 606..716
AAA_16 [PF13191], Evalue: 7.30E-10, Aligned region: 65..73
AAA_16 [PF13191], Evalue: 7.30E-10, Aligned region: 199..244
AAA_16 [PF13191], Evalue: 7.30E-10, Aligned region: 267..301
AAA_16 [PF13191], Evalue: 7.30E-10, Aligned region: 476..569
AAA_16 [PF13191], Evalue: 7.30E-10, Aligned region: 576..651
AAA_22 [PF13401], Evalue: 2.50E-09, Aligned region: 222..302
AAA_22 [PF13401], Evalue: 2.50E-09, Aligned region: 354..388
AAA_22 [PF13401], Evalue: 2.50E-09, Aligned region: 542..565
AAA_22 [PF13401], Evalue: 2.50E-09, Aligned region: 605..629
AAA_22 [PF13401], Evalue: 2.50E-09, Aligned region: 667..690
Sigma54_activat [PF00158], Evalue: 2.80E-08, Aligned region: 208..244
Sigma54_activat [PF00158], Evalue: 2.80E-08, Aligned region: 376..393
Sigma54_activat [PF00158], Evalue: 2.80E-08, Aligned region: 606..706
Clp_N [PF02861], Evalue: 3.00E-07, Aligned region: 26..75
Clp_N [PF02861], Evalue: 3.00E-07, Aligned region: 111..135
AAA_17 [PF13207], Evalue: 1.20E-06, Aligned region: 24..106
AAA_17 [PF13207], Evalue: 1.20E-06, Aligned region: 222..277
AAA_17 [PF13207], Evalue: 1.20E-06, Aligned region: 605..642
AAA_19 [PF13245], Evalue: 4.90E-06, Aligned region: 221..245
AAA_19 [PF13245], Evalue: 4.90E-06, Aligned region: 371..399
AAA_19 [PF13245], Evalue: 4.90E-06, Aligned region: 604..631
IstB_IS21 [PF01695], Evalue: 6.60E-06, Aligned region: 204..244
IstB_IS21 [PF01695], Evalue: 6.60E-06, Aligned region: 606..626
NACHT [PF05729], Evalue: 3.30E-05, Aligned region: 222..254
NACHT [PF05729], Evalue: 3.30E-05, Aligned region: 606..634
AAA_18 [PF13238], Evalue: 5.30E-05, Aligned region: 222..245
AAA_18 [PF13238], Evalue: 5.30E-05, Aligned region: 607..635
Zeta_toxin [PF06414], Evalue: 5.60E-05, Aligned region: 220..243
Zeta_toxin [PF06414], Evalue: 5.60E-05, Aligned region: 469..507
Zeta_toxin [PF06414], Evalue: 5.60E-05, Aligned region: 597..646
AAA_14 [PF13173], Evalue: 7.20E-05, Aligned region: 222..302
AAA_14 [PF13173], Evalue: 7.20E-05, Aligned region: 605..693
AAA_29 [PF13555], Evalue: 9.50E-05, Aligned region: 214..238
AAA_29 [PF13555], Evalue: 9.50E-05, Aligned region: 604..631
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 201..238
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 274..305
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 605..627
Arch_ATPase [PF01637], Evalue: 0.0012, Aligned region: 671..688
Hpr_kinase_C [PF07475], Evalue: 0.0048, Aligned region: 222..234
Hpr_kinase_C [PF07475], Evalue: 0.0048, Aligned region: 603..625
RNA_helicase [PF00910], Evalue: 0.0059, Aligned region: 223..243
RNA_helicase [PF00910], Evalue: 0.0059, Aligned region: 607..628
DUF815 [PF05673], Evalue: 0.0065, Aligned region: 214..298
DUF815 [PF05673], Evalue: 0.0065, Aligned region: 601..645
NTPase_1 [PF03266], Evalue: 0.0078, Aligned region: 222..244
NTPase_1 [PF03266], Evalue: 0.0078, Aligned region: 273..299
NTPase_1 [PF03266], Evalue: 0.0078, Aligned region: 606..627
Protein Sequence: 869 a.a.     [Download]
>gi|410418576|ref|YP_006899025.1| ATPase [Bordetella bronchiseptica MO149]
MSDIGRAELFGKLDSLSYRALEDATALCKLRGNPYVELAHWVHAIAHAQDSDLHHIARAFELDLGALQQD
LVRALDQLPRGAGAVSDLSEHVDHVAERAWALASLRYGAARIRSGHLLLALLRDPSLRGVLAGMSGQFAR
VVPDLLLQGLPEMTRGSPEARADAAVADAPPDGGGAAGALARYAVDLTAQARAGRLDPVTGRDDEIRQLI
DVLMRRRQNNPLLTGEAGVGKTAVVEGLALRLARGDVPAPLREVTLYLLDIGLLQAGAGVKGEFEQRLRQ
VIDAVQGSERPIVLFIDEIHTLVGAGGAAGTGDAANLLKPALARGQLRTIGATTWAEYKQYIEKDPALTR
RFQAIQVHEPDEAGARRMLRGLAGALQAHHGVLLLDEAVEAAVRLSHRYIPARQLPDKAVALLDTACARV
AVSQQATPAALEDARRRIDALDLELEIAAREARLDAGPAERVAGLREQGLAARAEADALAARWEREAALA
GQVFGLREQLDAADEQAAPALRAALREAADALARSQGEAPLIHPAVDAAAVAAVVADWTGIPVGRMVRDE
AQAVLALADTLERRVVGQRHALELIARRIQTARAGLTDPGKPVGVFLLCGPSGVGKTETALALAEALYGG
EQNLITINMSEFQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPHSVVLLDEVEKAHADVHEIFFQVFD
KGWMEDGEGRYIDFRNTVILLTANVGADLIASLCADPELAPEPDALAAALRAPLRDVFPAALLGRLAAVP
YLPLSDSMLAHIVALQFERVGQRLRERHGMDLEVDPAAAELVVARCAEVESGARMVDAILSQRVLPQIGR
ELLGASLQQRTWRRVRVRAVDGEFACEYE
 
Nucleotide Sequence: 2610 bp     [Download]
>gi|410417816|ref|NC_018829.1|:830042-832651 Bordetella bronchiseptica MO149, complete genome
ATGTCCGATATCGGCCGCGCCGAGCTGTTCGGCAAACTCGATTCCCTGTCCTATCGCGCCCTGGAGGACG
CCACCGCCCTGTGCAAGCTGCGCGGCAATCCCTACGTGGAGCTGGCGCACTGGGTGCACGCCATCGCGCA
CGCGCAGGACAGCGACCTGCACCATATCGCGCGCGCGTTCGAGCTGGATCTCGGCGCGCTGCAGCAAGAC
CTGGTGCGCGCGCTCGACCAATTGCCGCGCGGGGCGGGGGCGGTCTCGGACCTCTCCGAGCACGTGGACC
ACGTGGCGGAACGCGCCTGGGCGCTGGCGTCGCTGCGCTACGGCGCTGCGCGCATCCGCAGCGGGCACCT
GCTGCTGGCGCTGCTGCGCGACCCCAGCCTGCGCGGCGTGCTGGCCGGCATGTCGGGGCAGTTCGCCCGC
GTCGTGCCGGACCTGCTGCTGCAAGGCCTGCCCGAGATGACGCGCGGCTCGCCCGAGGCGCGCGCCGACG
CTGCCGTGGCCGATGCGCCGCCGGATGGCGGCGGCGCGGCCGGCGCGCTGGCGCGCTACGCGGTGGACCT
GACCGCCCAGGCGCGCGCCGGCCGGCTCGATCCGGTGACCGGACGCGACGACGAAATCCGCCAGTTGATC
GACGTGCTGATGCGGCGGCGCCAGAACAATCCCCTGCTGACCGGCGAGGCCGGCGTGGGCAAGACCGCGG
TGGTCGAGGGCCTGGCCCTGCGGCTGGCGCGCGGCGATGTGCCGGCGCCGCTGCGCGAGGTGACGCTGTA
CCTGCTGGATATCGGGTTGTTGCAAGCCGGCGCCGGCGTCAAGGGCGAGTTCGAGCAGCGCTTGCGCCAG
GTCATCGACGCGGTGCAGGGCAGCGAACGCCCCATCGTGCTGTTCATCGACGAAATCCATACCCTGGTGG
GGGCGGGCGGCGCGGCGGGGACGGGCGATGCCGCCAACCTGCTCAAGCCGGCGCTGGCGCGCGGACAGCT
GCGCACCATCGGCGCCACGACCTGGGCCGAATACAAGCAGTACATCGAGAAAGACCCGGCGCTGACGCGG
CGCTTCCAGGCCATCCAGGTGCACGAGCCCGACGAGGCCGGCGCGCGGCGCATGCTGCGCGGCCTGGCCG
GCGCCCTGCAGGCGCATCATGGCGTGCTGCTGCTGGACGAGGCCGTGGAGGCCGCCGTGCGGCTGTCGCA
TCGCTACATCCCGGCGCGCCAGTTGCCGGACAAGGCGGTCGCCTTGCTCGACACGGCCTGCGCGCGCGTG
GCGGTCAGCCAGCAAGCCACGCCGGCCGCGCTGGAAGACGCGCGCCGCCGCATCGACGCGCTGGATCTCG
AGCTGGAAATCGCCGCACGCGAGGCGCGGCTGGACGCCGGCCCGGCCGAGCGCGTGGCGGGGCTGCGCGA
GCAGGGCCTGGCGGCGCGCGCCGAGGCCGACGCCCTGGCGGCGCGCTGGGAGCGCGAAGCGGCGCTGGCC
GGCCAGGTGTTCGGCCTGCGCGAACAGCTGGACGCGGCCGACGAGCAGGCCGCGCCGGCCTTGCGCGCCG
CGCTGCGCGAGGCCGCCGACGCGCTGGCGCGCAGCCAGGGCGAGGCGCCGCTGATCCATCCGGCGGTCGA
CGCCGCGGCCGTGGCGGCCGTGGTGGCCGATTGGACCGGTATCCCCGTGGGCCGCATGGTGCGCGACGAA
GCGCAGGCCGTGCTGGCGCTGGCCGACACCCTGGAGCGCCGCGTCGTCGGCCAGCGCCATGCGCTGGAAC
TGATCGCGCGCCGCATCCAGACGGCGCGCGCCGGCCTGACCGACCCGGGCAAGCCGGTCGGCGTGTTCCT
GCTGTGCGGCCCGAGCGGCGTGGGCAAGACCGAGACCGCGCTGGCTCTGGCCGAGGCCTTGTACGGCGGT
GAGCAGAATCTCATCACCATCAACATGAGCGAGTTCCAGGAGTCGCACACGGTGTCGACCCTGAAGGGCG
CGCCGCCGGGCTATGTGGGCTACGGCGAGGGCGGCGTGCTGACCGAGGCGGTGCGGCGCCGCCCGCATAG
CGTGGTGCTGCTCGACGAGGTCGAGAAAGCCCACGCCGACGTGCACGAGATTTTCTTCCAGGTGTTCGAC
AAGGGGTGGATGGAAGACGGCGAAGGCCGTTACATCGATTTCCGCAACACGGTCATCCTGCTGACCGCCA
ACGTGGGCGCGGACCTGATCGCCAGCCTGTGCGCCGACCCCGAGCTGGCGCCCGAGCCCGACGCGCTGGC
GGCGGCCCTGCGCGCGCCGCTGCGCGACGTGTTTCCCGCGGCCTTGCTGGGCCGCCTGGCGGCCGTGCCC
TATCTGCCGCTGTCGGACAGCATGCTGGCGCACATCGTGGCCTTGCAGTTCGAACGCGTCGGCCAGCGCC
TGCGCGAGCGCCACGGCATGGATTTGGAAGTCGACCCGGCCGCCGCCGAGCTGGTGGTGGCGCGCTGCGC
CGAGGTCGAGTCCGGCGCGCGCATGGTCGACGCCATCCTGAGCCAGCGCGTCCTGCCGCAGATCGGCCGC
GAATTGCTGGGCGCCTCCCTGCAGCAACGCACCTGGCGCCGCGTGCGCGTGCGGGCGGTCGACGGCGAGT
TCGCCTGCGAGTACGAGTAG
 Primer design