SecReT6
Protein ID: 537437141
SecReT6 ID842
T6SS typei1
Gene symbol-
Locus tagSPUCDC_1887
StrainSalmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67
Repliconchromosome [GenBank: NC_022221] [Browse all T6SS(s) in this replicon]
Location [Strand]1881848..1882252 [-]
Producthypothetical protein
NoteTssD
UniProt IDT1YIG7
KEGG IDsega:SPUCDC_1887
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 1.20E-29, Aligned region: 2..117
DCAF15_WD40 [PF14939], Evalue: 0.0026, Aligned region: 55..98
Protein Sequence: 134 a.a.     [Download]
>gi|537437141|ref|YP_008481518.1| hypothetical protein SPUCDC_1887 [Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67]
MLVQEFLHNVTVPTDPQSGQPSGQRSHKPFIFTVALNKAVPLLYNALASGEMLPKTELHWWRTSVEGKQE
HYFTTRLTDSTIVDMKLHMPHCQDPAKREFTQLLEVSLAYRKIEWEHVKSGTSGADDWRAPLEA
 
Nucleotide Sequence: 405 bp     [Download]
>gi|537435369|ref|NC_022221.1|:c1882252-1881848 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67, complete genome
ATGCTGGTACAGGAATTCCTGCATAACGTGACCGTACCCACTGATCCACAGTCCGGGCAGCCGAGCGGCC
AGCGTTCGCACAAGCCGTTCATTTTTACCGTGGCGCTGAACAAAGCCGTACCGCTGCTGTACAACGCGCT
GGCGTCCGGTGAAATGCTGCCGAAAACCGAACTGCACTGGTGGCGTACTTCCGTTGAAGGCAAGCAGGAG
CATTACTTCACCACCCGCCTGACGGACTCAACGATTGTGGATATGAAACTGCATATGCCGCACTGTCAGG
ACCCGGCAAAGCGCGAATTCACGCAGTTGCTCGAAGTCTCGCTGGCCTACCGCAAAATCGAGTGGGAACA
CGTCAAATCCGGCACCTCTGGCGCGGATGACTGGCGCGCGCCGCTGGAAGCGTAA
 Primer design

Protein ID: 537437157
SecReT6 ID842
T6SS typei1
Gene symbol-
Locus tagSPUCDC_1904
StrainSalmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67
Repliconchromosome [GenBank: NC_022221] [Browse all T6SS(s) in this replicon]
Location [Strand]1902197..1902676 [+]
Producthypothetical protein
NoteTssD
UniProt IDT1YHC8
KEGG IDsega:SPUCDC_1904
PDB IDNA
Domain hit(s) vs Pfam DUF796 [PF05638], Evalue: 1.80E-29, Aligned region: 6..143
Protein Sequence: 159 a.a.     [Download]
>gi|537437157|ref|YP_008481534.1| hypothetical protein SPUCDC_1904 [Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67]
MANLIYLTLNGEKQGLISAGCCSLDSIGNKAQLLHLDHIMVYELTHGLSRDQNVNHHSVTIKKPVDKSSP
LLGKAINDNEILTCTFDFYRTNRFGINEKYYKLELKNARISDINFSIAHVVIDSEAQPQESISFIYESIN
WEHCIAGTSAFSLWDERVF
 
Nucleotide Sequence: 480 bp     [Download]
>gi|537435369|ref|NC_022221.1|:1902197-1902676 Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67, complete genome
ATGGCCAATTTAATTTATTTAACACTGAACGGTGAAAAGCAAGGATTGATTTCAGCAGGTTGTTGTTCCC
TTGACTCTATCGGTAATAAAGCACAGTTACTGCACCTTGATCATATTATGGTATATGAACTGACACATGG
GTTAAGTCGGGATCAAAATGTCAATCATCATTCAGTTACGATAAAAAAACCTGTCGATAAATCATCTCCT
TTACTGGGAAAAGCAATTAACGATAATGAAATATTGACCTGCACTTTTGATTTTTATCGAACAAATCGAT
TTGGTATTAATGAAAAATATTACAAACTGGAATTAAAAAACGCCCGAATTAGTGATATTAATTTCTCGAT
TGCGCATGTAGTCATTGACAGTGAAGCACAACCTCAGGAAAGTATTTCTTTTATATATGAATCCATAAAC
TGGGAACACTGTATTGCCGGGACCAGTGCATTCAGTTTATGGGATGAGAGGGTGTTTTAG
 Primer design